RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TBC1D3GQ6DHY5 549 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3CQ6IPX1 549 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 NEK5Q6P3R8 708 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 IL27RAQ6UWB1 636 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TMCO3Q6UWJ1 677 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 PARS2Q7L3T8 475 aaKnown RBP11.71□□□□□ -0.53
SLIRP-205ENST00000556310 TBC1D3Q8IZP1 549 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-205ENST00000556310 RYBPQ8N488 228 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-205ENST00000556310 OR6K2Q8NGY2 324 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 FAM71BQ8TC56 605 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 SLC6A18Q96N87 628 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 OSBPL1AQ9BXW6 950 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 EBF2Q9HAK2 575 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 LHX3Q9UBR4 397 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 DMTF1Q9Y222 760 aa11.71□□□□□ -0.53
SLIRP-205ENST00000556310 A0A1B0GVT2 93 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 UPK3BL1B0FP48 263 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 UPK3BL2E5RIL1 263 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 J3KR12 359 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 DFFAO00273 331 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 GJB3O75712 270 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 POP4O95707 220 aaKnown RBP11.7□□□□□ -0.54
SLIRP-205ENST00000556310 KRT7P08729 469 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 ADRB3P13945 408 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 AMPD1P23109 780 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 GKP32189 559 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 SERPINB6P35237 376 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 GJC1P36383 396 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 GCGRP47871 477 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 CSNK1EP49674 416 aaKnown RBP11.7□□□□□ -0.54
SLIRP-205ENST00000556310 ARSEP51690 589 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 RAD51Q06609 339 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 IL10RBQ08334 325 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 MYLK3Q32MK0 819 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 SETMARQ53H47 684 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF805Q5CZA5 627 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 PPM1JQ5JR12 505 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 NAPEPLDQ6IQ20 393 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 ADAT2Q7Z6V5 191 aaKnown RBP11.7□□□□□ -0.54
SLIRP-205ENST00000556310 PRPF39Q86UA1 669 aaKnown RBP11.7□□□□□ -0.54
SLIRP-205ENST00000556310 CPNE8Q86YQ8 564 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 OR2I1PQ8NGU4 316 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 VOPP1Q96AW1 172 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF670Q9BS34 389 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 SP110Q9HB58 689 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 ETNK2Q9NVF9 386 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 IPO11Q9UI26 975 aaKnown RBP11.7□□□□□ -0.54
SLIRP-205ENST00000556310 MFHAS1Q9Y4C4 1052 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 CABIN1Q9Y6J0 2220 aa11.7□□□□□ -0.54
SLIRP-205ENST00000556310 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 VILLO15195 856 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 AP1G1O43747 822 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 RNGTTO60942 597 aaKnown RBP11.69□□□□□ -0.54
SLIRP-205ENST00000556310 LCA5LO95447 670 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 UGT2B4P06133 528 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF883P0CG24 379 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 CSRP1P21291 193 aaKnown RBP11.69□□□□□ -0.54
SLIRP-205ENST00000556310 CD38P28907 300 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 MAT2AP31153 395 aaKnown RBP11.69□□□□□ -0.54
SLIRP-205ENST00000556310 ARHGAP25P42331 645 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 TAS2R40P59535 323 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 SLC14A1Q13336 389 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 DPYSL3Q14195 570 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 MESDQ14696 234 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 RFTN1Q14699 578 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-205ENST00000556310 PDK2Q15119 407 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 TCEAL1Q15170 157 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 CYTH1Q15438 398 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 KIF19Q2TAC6 998 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 TMCO4Q5TGY1 634 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 FBXL19Q6PCT2 694 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 LAYNQ6UX15 382 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 ARHGAP36Q6ZRI8 547 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 ZSCAN30Q86W11 494 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 HORMAD1Q86X24 394 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 CCDC170Q8IYT3 715 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 ATPAF2Q8N5M1 289 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 NETO2Q8NC67 525 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 RAB7BQ96AH8 199 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 SKA1Q96BD8 255 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 SERAC1Q96JX3 654 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 EXOC2Q96KP1 924 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 ZNF599Q96NL3 588 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 PANX2Q96RD6 677 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 CINPQ9BW66 212 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-205ENST00000556310 CPEB1Q9BZB8 566 aaKnown RBP11.69□□□□□ -0.54
SLIRP-205ENST00000556310 GAREM1Q9H706 876 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 AASDHPPTQ9NRN7 309 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 ANKRD6Q9Y2G4 727 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 FADS3Q9Y5Q0 445 aa11.69□□□□□ -0.54
SLIRP-205ENST00000556310 PCNX2A6NKB5 2137 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 A0A1W2PR77 199 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 MED19A0JLT2 244 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-205ENST00000556310 C16orf96A6NNT2 1141 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 TMEM110-MUSTN1A8MSY1 372 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 PRAMEF26H0Y7S4 382 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 PALMO75781 387 aa11.68□□□□□ -0.54
SLIRP-205ENST00000556310 KCNK5O95279 499 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms