RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 AGO1Q9UL18 857 aaKnown RBP9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 TRAF3IP3Q9Y228 551 aa9.34□□□□□ -0.91
GTF2A1-204ENST00000556268 LOC400499M0QZD8 3231 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 C7orf72A4D263 438 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 NR3C1P04150 777 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 ATXN1LP0C7T5 689 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 RALAP11233 206 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 ADORA2BP29275 332 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 ZNF234Q14588 700 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 EIF4HQ15056 248 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 ZNF385BQ569K4 471 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 RAB41Q5JT25 222 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 PM20D1Q6GTS8 502 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 KIAA1324Q6UXG2 1013 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 LZTR1Q8N653 840 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 CELF2-AS1Q8N7Q2 184 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 TAS1R2Q8TE23 839 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 SETD7Q8WTS6 366 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 UCMAQ8WVF2 138 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 PRCCQ92733 491 aaPredicted RBP9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 TMEM245Q9H330 911 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 EIF2B4Q9UI10 523 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 STOML2Q9UJZ1 356 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 GOLGA4Q13439 2230 aaKnown RBP9.33□□□□□ -0.92
GTF2A1-204ENST00000556268 KRTAP4-8A0A0G2JLE6 195 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 ZC3H12DA2A288 527 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 C10orf142B7Z368 130 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 SYNCRIPO60506 623 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 TSPAN3O60637 253 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 CER1O95813 267 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 PRKCHP24723 683 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 CORO1AP31146 461 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 MATKP42679 507 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 CSNK1EP49674 416 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 PPP3CAQ08209 521 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 KIF19Q2TAC6 998 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 COL28A1Q2UY09 1125 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 FBLN7Q53RD9 439 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 ARHGAP17Q68EM7 881 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 ATL3Q6DD88 541 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 ANKS1BQ7Z6G8 1248 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 DENND1CQ8IV53 801 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 GRAMD1CQ8IYS0 662 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 ZCCHC9Q8N567 271 aaKnown RBP9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 MDM1Q8TC05 714 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 ORAI3Q9BRQ5 295 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 MARCH2Q9P0N8 246 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 SLCO1B1Q9Y6L6 691 aa9.32□□□□□ -0.92
GTF2A1-204ENST00000556268 A0A087WV48 116 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 A0A1B0GVT2 93 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 TRABD2BA6NFA1 517 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 MEI4A8MW99 385 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 FLRT2O43155 660 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 PAPSS1O43252 624 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 PCDHGA12O60330 932 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 NPHS1O60500 1241 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 TRIM21P19474 475 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 HLA-FP30511 346 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 GTF2H1P32780 548 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 ACSL1P33121 698 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 GCLMP48507 274 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 VAMP7P51809 220 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 AFF3P51826 1226 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 RAD23BP54727 409 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 PRR5P85299 388 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 ZBTB16Q05516 673 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 EFEMP1Q12805 493 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 SMAD1Q15797 465 aaKnown RBP9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 BHLHA9Q7RTU4 235 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 ADIPOR2Q86V24 386 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 PIGZQ86VD9 579 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 ARHGAP18Q8N392 663 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 ANKRD52Q8NB46 1076 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 SLC4A11Q8NBS3 891 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 OR2T3Q8NH03 318 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 FRS2Q8WU20 508 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 SORCS1Q8WY21 1168 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 BBC3Q96PG8 261 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 C6orf106Q9H6K1 298 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 ST7Q9NRC1 585 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 ANKRD6Q9Y2G4 727 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 FRMD4BQ9Y2L6 1034 aa9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.31□□□□□ -0.92
GTF2A1-204ENST00000556268 PTPRBP23467 1997 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 SLC12A8A0AV02 714 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 E9PAM4 449 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 TNFSF14O43557 240 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 CALUO43852 315 aaPredicted RBP9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 MYL1P05976 194 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 ACADMP11310 421 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 CMA1P23946 247 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 CD27P26842 260 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 HOXD9P28356 352 aaPredicted RBP9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 PIK3CAP42336 1068 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 RPS14P62263 151 aaKnown RBP9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 NUMA1Q14980 2115 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 MPPE1Q53F39 396 aa9.3□□□□□ -0.92
GTF2A1-204ENST00000556268 KCNT1Q5JUK3 1230 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms