RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ZNF441Q8N8Z8 693 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 MAPK1IP1LQ8NDC0 245 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 FAM71BQ8TC56 605 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 TAS1R2Q8TE23 839 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 IPO4Q8TEX9 1081 aaKnown RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 HDAC7Q8WUI4 952 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 MUL1Q969V5 352 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 ZNF501Q96CX3 271 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 RMDN3Q96TC7 470 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 HERPUD2Q9BSE4 406 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 MECRQ9BV79 373 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 EBF2Q9HAK2 575 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 CLK4Q9HAZ1 481 aaKnown RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 OBP2BQ9NPH6 170 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 AQP12BA6NM10 295 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 KIF28PB7ZC32 967 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 ACKR2O00590 384 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 PIP5K1CO60331 668 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 NBNO60934 754 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 FCGR2AP12318 317 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 CKMT1AP12532 417 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 PRPH2P23942 346 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 TYK2P29597 1187 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 FMO4P31512 558 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 SERPINF1P36955 418 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 CLCN3P51790 818 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 CLCNKBP51801 687 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 OAZ1P54368 228 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 LINC01547P58512 204 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-218ENST00000556256 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 ZBTB17Q13105 803 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 BLMHQ13867 455 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 CALCRLQ16602 461 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 LIN54Q6MZP7 749 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 CCDC174Q6PII3 467 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 FBXO38Q6PIJ6 1188 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 C19orf48Q6RUI8 117 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 FAR1Q8WVX9 515 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 EID2BQ96D98 161 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 PYGO2Q9BRQ0 406 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 MSTO1Q9BUK6 570 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 HDHD5Q9BXW7 423 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 BARHL1Q9BZE3 327 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.38□□□□□ -1.87
SCFD1-218ENST00000556256 FBRSL1Q9HCM7 1045 aaKnown RBP3.38□□□□□ -1.87
SCFD1-218ENST00000556256 ZNF711Q9Y462 761 aa3.38□□□□□ -1.87
SCFD1-218ENST00000556256 TIMM23O14925 209 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 GLP2RO95838 553 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 IGHV4-30-4P0DP06 118 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 NPPBP16860 134 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 CHKAP35790 457 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 RPL3P39023 403 aaKnown RBP3.37□□□□□ -1.87
SCFD1-218ENST00000556256 HALP42357 657 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 GRK6P43250 576 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 CCDC38Q502W7 563 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 TANGO2Q6ICL3 276 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 ZNF497Q6ZNH5 498 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 CERS3Q8IU89 383 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 STT3BQ8TCJ2 826 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 STYXQ8WUJ0 223 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 WDR60Q8WVS4 1066 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 DCTN5Q9BTE1 182 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 NPFFR1Q9GZQ6 430 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 PPCSQ9HAB8 311 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 GRHPRQ9UBQ7 328 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 OSGIN2Q9Y236 505 aa3.37□□□□□ -1.87
SCFD1-218ENST00000556256 PIP5K1BO14986 540 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 DDAH2O95865 285 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 KLRK1P26718 216 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 MARK3P27448 753 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 PDCD2Q16342 344 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-218ENST00000556256 TMEM95Q3KNT9 176 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 FAM69BQ5VUD6 431 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 ANO1Q5XXA6 986 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 MTFR2Q6P444 385 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 KIAA1324Q6UXG2 1013 aaKnown RBP3.36□□□□□ -1.87
SCFD1-218ENST00000556256 SPAG16Q8N0X2 631 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 MYCT1Q8N699 235 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 OR1N1Q8NGS0 311 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 MTBPQ96DY7 904 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 FRG2BQ96QU4 278 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 NPAS1Q99742 590 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 ISCA1Q9BUE6 129 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 DDX23Q9BUQ8 820 aaKnown RBP3.36□□□□□ -1.87
SCFD1-218ENST00000556256 KATNAL1Q9BW62 490 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 MOV10L1Q9BXT6 1211 aaKnown RBP3.36□□□□□ -1.87
SCFD1-218ENST00000556256 TP63Q9H3D4 680 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-218ENST00000556256 LRRC4Q9HBW1 653 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 TMEM51Q9NW97 253 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 SLC25A13Q9UJS0 675 aa3.36□□□□□ -1.87
SCFD1-218ENST00000556256 MORC2Q9Y6X9 1032 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-218ENST00000556256 hCG_1642624A0A1W2PR95 340 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 ASNA1O43681 348 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 TNFRSF6BO95407 300 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 VNN2O95498 520 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 CETPP11597 493 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 ALDH4A1P30038 563 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 PNLIPRP1P54315 467 aa3.35□□□□□ -1.87
SCFD1-218ENST00000556256 RNASELQ05823 741 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms