RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ZNF599Q96NL3 588 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TGS1Q96RS0 853 aaKnown RBP8.43□□□□□ -1.06
ATXN3-235ENST00000556082 CEP41Q9BYV8 373 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SLC25A51Q9H1U9 297 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 RABEP2Q9H5N1 569 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 KIF9Q9HAQ2 790 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 RXFP1Q9HBX9 757 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 MRM3Q9HC36 420 aaKnown RBP8.43□□□□□ -1.06
ATXN3-235ENST00000556082 ENTPD7Q9NQZ7 604 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATXN3-235ENST00000556082 VPS45Q9NRW7 570 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 RBM22Q9NW64 420 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SYBUQ9NX95 663 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 MPP6Q9NZW5 540 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SAMD15Q9P1V8 674 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SOX13Q9UN79 622 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 SSX2IPQ9Y2D8 614 aa8.43□□□□□ -1.06
ATXN3-235ENST00000556082 TET1Q8NFU7 2136 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 ZCWPW2A0A1B0GU75 182 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 TRIM43BA6NCK2 446 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 KLF11O14901 512 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 ACSL4O60488 711 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 LPXNO60711 386 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 LATS1O95835 1130 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 MOCS2O96007 188 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 TACR2P21452 398 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 CRHR1P34998 444 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 GP5P40197 560 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 HADHAP40939 763 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 ALDH1A3P47895 512 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 SLC11A2P49281 568 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 CORO7P57737 925 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 WDR5P61964 334 aaKnown RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 SLC14A2Q15849 920 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 LRRC26Q2I0M4 334 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 RSPO4Q2I0M5 234 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 ALFQ53S48 1182 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 PCID2Q5JVF3 399 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 FAM182AQ5T1J6 154 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 GRTP1Q5TC63 336 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 MARC1Q5VT66 337 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 NADSYN1Q6IA69 706 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 DENND5AQ6IQ26 1287 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 CASC4Q6P4E1 433 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 PKN3Q6P5Z2 889 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 LVRNQ6Q4G3 990 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 PACS1Q6VY07 963 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 KYAT3Q6YP21 454 aaKnown RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 ARHGAP36Q6ZRI8 547 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 C8orf86Q6ZUL3 223 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 OTOP3Q7RTS5 596 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 SRLQ86TD4 932 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 TAX1BP1Q86VP1 789 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 MIB1Q86YT6 1006 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 TMEM199Q8N511 208 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 DNAAF3Q8N9W5 541 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 DIS3LQ8TF46 1054 aaKnown RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 IGSF8Q969P0 613 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 ISL2Q96A47 359 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 TRIM43Q96BQ3 446 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 MRRFQ96E11 262 aaKnown RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 IMP4Q96G21 291 aaKnown RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 CERS2Q96G23 380 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 CABS1Q96KC9 395 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 FCRL3Q96P31 734 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 CPNE1Q99829 537 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 DDX50Q9BQ39 737 aaKnown RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 MAGEH1Q9H213 219 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 CCSER2Q9H7U1 834 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 ATP13A1Q9HD20 1204 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 DNAJB12Q9NXW2 375 aaKnown RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 NSMCE4AQ9NXX6 385 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 TRPM5Q9NZQ8 1165 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 FRRS1LQ9P0K9 344 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 PRKAG3Q9UGI9 489 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 STOML2Q9UJZ1 356 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 PLLPQ9Y342 182 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 USP15Q9Y4E8 981 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 MRPL42Q9Y6G3 142 aaKnown RBP8.42□□□□□ -1.06
ATXN3-235ENST00000556082 RPS6KL1Q9Y6S9 549 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 COL4A6Q14031 1691 aa8.42□□□□□ -1.06
ATXN3-235ENST00000556082 FNDC1Q4ZHG4 1894 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 CCT8L1PA6NM43 557 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 F5H5T6 163 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 COPEO14579 308 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 BIRC5O15392 142 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 UGT1A9O60656 530 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 RAMP2O60895 175 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 RGS9O75916 674 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 PIAS1O75925 651 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 CNTN5O94779 1100 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 KIAA0754O94854 1291 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 EPOP01588 193 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 HLA-DQB2P05538 268 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 URODP06132 367 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 CSF2RAP15509 400 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 RPL17P18621 184 aaKnown RBP8.41□□□□□ -1.06
ATXN3-235ENST00000556082 DNAJB1P25685 340 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 MAGEA12P43365 314 aa8.41□□□□□ -1.06
ATXN3-235ENST00000556082 POLD2P49005 469 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms