RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 CYP4F3Q08477 520 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 SYCP1Q15431 976 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 C15orf59Q2T9L4 293 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ARL13BQ3SXY8 428 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 RAB6CQ53S08 254 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 CT47A1Q5JQC4 288 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 PIP5KL1Q5T9C9 394 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 TMEM164Q5U3C3 297 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 RETSATQ6NUM9 610 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 C22orf39Q6P5X5 142 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 DPY19L3Q6ZPD9 716 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 TRIM69Q86WT6 500 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF677Q86XU0 584 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 SPATS2Q86XZ4 545 aaKnown RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF354CQ86Y25 554 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 RYBPQ8N488 228 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 OXR1Q8N573 874 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ANKRD20A12PQ8NF67 263 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ENOX1Q8TC92 643 aaKnown RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 SAP25Q8TEE9 199 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 RXFP2Q8WXD0 754 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ARRDC3Q96B67 414 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 BBC3Q96PG8 261 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 HAPLN3Q96S86 360 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 RAB6CQ9H0N0 254 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 GANQ9H2C0 597 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 PREBQ9HCU5 417 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ATP13A1Q9HD20 1204 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 FZD3Q9NPG1 666 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 SEPT11Q9NVA2 429 aaKnown RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 FANCLQ9NW38 375 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 ARHGAP20Q9P2F6 1191 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 IL36AQ9UHA7 158 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 DNAI1Q9UI46 699 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 TMEM59LQ9UK28 342 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 NOCTQ9UK39 431 aaKnown RBP6.83□□□□□ -1.32
PSEN1-216ENST00000556066 DMTF1Q9Y222 760 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 RAXQ9Y2V3 346 aa6.83□□□□□ -1.32
PSEN1-216ENST00000556066 SHROOM3Q8TF72 1996 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 ANKRD36A6QL64 1941 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 IGLV3-10A0A075B6K4 115 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 TMEM229AB2RXF0 380 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 C10orf142B7Z368 130 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 RNF103O00237 685 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 EPHB6O15197 1021 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 LEFTY1O75610 366 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 RFPL3O75679 317 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 THEGLP0DJG4 465 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 CHRNB2P17787 502 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 MMP8P22894 467 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 AKT2P31751 481 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 HNF1BP35680 557 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 ACVRL1P37023 503 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 STAT1P42224 750 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 NSFP46459 744 aaKnown RBP6.82□□□□□ -1.32
PSEN1-216ENST00000556066 SERPINH1P50454 418 aaKnown RBP6.82□□□□□ -1.32
PSEN1-216ENST00000556066 COPB1P53618 953 aaKnown RBP6.82□□□□□ -1.32
PSEN1-216ENST00000556066 CLDN2P57739 230 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 FMO1Q01740 532 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 UBXN1Q04323 297 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 SLC20A2Q08357 652 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 OVGP1Q12889 678 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 SMAD1Q15797 465 aaKnown RBP6.82□□□□□ -1.32
PSEN1-216ENST00000556066 ZNF284Q2VY69 593 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 CCDC14Q49A88 953 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 HS1BP3Q53T59 392 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 ACBD5Q5T8D3 534 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-216ENST00000556066 CDKAL1Q5VV42 579 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 SEL1L3Q68CR1 1132 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 FBXL19Q6PCT2 694 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 SASS6Q6UVJ0 657 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 TRIM72Q6ZMU5 477 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 LEKR1Q6ZMV7 388 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 ERN2Q76MJ5 926 aaKnown RBP6.82□□□□□ -1.32
PSEN1-216ENST00000556066 PDZD3Q86UT5 571 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 IQCHQ86VS3 1027 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 HORMAD1Q86X24 394 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 RNF214Q8ND24 703 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 TMIEQ8NEW7 156 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 NEK11Q8NG66 645 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 OR6K2Q8NGY2 324 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 JOSD2Q8TAC2 188 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 HNRNPLLQ8WVV9 542 aaKnown RBP6.82□□□□□ -1.32
PSEN1-216ENST00000556066 FAM131CQ96AQ9 280 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 PPP1R16AQ96I34 528 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 HEPHQ9BQS7 1158 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 CALN1Q9BXU9 219 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 MAGEB5Q9BZ81 275 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 TM6SF2Q9BZW4 377 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 ZDHHC6Q9H6R6 413 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 ERVMER34-1Q9H9K5 563 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 RRAGDQ9NQL2 400 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-216ENST00000556066 TMEM51Q9NW97 253 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 OR12D3Q9UGF7 316 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 HPCAL4Q9UM19 191 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 ACTL7AQ9Y615 435 aa6.82□□□□□ -1.32
PSEN1-216ENST00000556066 LRRK1Q38SD2 2015 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 C2CD4BA6NLJ0 364 aa6.81□□□□□ -1.32
PSEN1-216ENST00000556066 FAM72CH0Y354 149 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms