RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 VN1R3Q9BXE9 311 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 IQCGQ9H095 443 aaKnown RBP6.62□□□□□ -1.35
PSEN1-214ENST00000555867 VPS11Q9H270 941 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 RABEP2Q9H5N1 569 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 SFXN1Q9H9B4 322 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 SLC2A4RGQ9NR83 387 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 RXFP3Q9NSD7 469 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 ABCC13Q9NSE7 274 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 TMEM161AQ9NX61 479 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.62□□□□□ -1.35
PSEN1-214ENST00000555867 KLF15Q9UIH9 416 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 FBXW11Q9UKB1 542 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 TRHDEQ9UKU6 1024 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 WASF3Q9UPY6 502 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 IRAK3Q9Y616 596 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 NOTCH4Q99466 2003 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 GREB1Q4ZG55 1949 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 LAMA5O15230 3695 aa6.62□□□□□ -1.35
PSEN1-214ENST00000555867 GOLGA4Q13439 2230 aaKnown RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ATG2BQ96BY7 2078 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 NUP205Q92621 2012 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 A0A1W2PNR3 127 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 TCRBV7S3A2A0A539 114 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 MYBPHLA2RUH7 354 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CFAP73A6NFT4 308 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CASTOR2A6NHX0 329 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SDR42E2A6NKP2 422 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SHISA7A6NL88 538 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 HHLA1C9JL84 531 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ANHXE9PGG2 379 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 RNF103O00237 685 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CLDN5O00501 218 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SYN3O14994 580 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 KHNYNO15037 678 aaKnown RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 HCRTO43612 131 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 MFSD11O43934 449 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ATP2C2O75185 946 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 DCTN3O75935 186 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 DNAJC8O75937 253 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ATP5HO75947 161 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 IL1BP01584 269 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 RETP07949 1114 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 FAM157BP0CG42 384 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 TROVE2P10155 538 aaKnown RBP eCLIP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CTSAP10619 480 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SLC2A3P11169 496 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 PGAM1P18669 254 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 KRT4P19013 534 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 TFE3P19532 575 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CD33P20138 364 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SKIV2L2P42285 1042 aaKnown RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CLCN4P51793 760 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 NRG1Q02297 640 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 YWHAHQ04917 246 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SLC18A2Q05940 514 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ACTN3Q08043 901 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SLC20A2Q08357 652 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 PPIDQ08752 370 aaKnown RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 IFRD2Q12894 506 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ELAVL2Q12926 359 aaKnown RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 NME3Q13232 169 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 FZD5Q13467 585 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 HTR4Q13639 388 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 UBXN2BQ14CS0 331 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SETDB1Q15047 1291 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CCDC6Q16204 474 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CSRP2Q16527 193 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 KCTD19Q17RG1 926 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 KBTBD12Q3ZCT8 623 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 RAB6CQ53S08 254 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ARSJQ5FYB0 599 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CLLU1OSQ5K130 101 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ZNF468Q5VIY5 522 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 OTUD1Q5VV17 481 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 LAIR1Q6GTX8 287 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CAPN12Q6ZSI9 719 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 TRPM8Q7Z2W7 1104 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 LINC00523Q86TU6 105 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CAND1Q86VP6 1230 aaKnown RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SPATA2LQ8IUW3 424 aaPredicted RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 C10orf67Q8IYJ2 551 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 BANPQ8N9N5 519 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 C3orf58Q8NDZ4 430 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ZMIZ2Q8NF64 920 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 GDAP1Q8TB36 358 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CCDC110Q8TBZ0 833 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 MGARPQ8TDB4 240 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ACMSDQ8TDX5 336 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 MZB1Q8WU39 189 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 CCT6BQ92526 530 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 LPPQ93052 612 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 STAMBPL1Q96FJ0 436 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 SERPINB11Q96P15 392 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 HAPLN3Q96S86 360 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 ELAC2Q9BQ52 826 aaKnown RBP6.61□□□□□ -1.35
PSEN1-214ENST00000555867 LPIN3Q9BQK8 851 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 COLEC11Q9BWP8 271 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 PITPNM3Q9BZ71 974 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 RAB6CQ9H0N0 254 aa6.61□□□□□ -1.35
PSEN1-214ENST00000555867 OSBPL2Q9H1P3 480 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms