RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 PIP4K2AP48426 406 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 HSD17B4P51659 736 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 PSMC6P62333 389 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 AIMP1Q12904 312 aaKnown RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 OLIG2Q13516 323 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 GALNT3Q14435 633 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 PPP2R5BQ15173 497 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 CDSNQ15517 529 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 KYNUQ16719 465 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 ME3Q16798 604 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 AWAT1Q58HT5 328 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 HECTD3Q5T447 861 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 JADE1Q6IE81 842 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 HMBOX1Q6NT76 420 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 CPLX2Q6PUV4 134 aaKnown RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 GLDNQ6ZMI3 551 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 GRASPQ7Z6J2 395 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 WDR5BQ86VZ2 330 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 RASAL3Q86YV0 1011 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 TEX11Q8IYF3 940 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 POMGNT2Q8NAT1 580 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 GABPB2Q8TAK5 448 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 HDAC7Q8WUI4 952 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 FAR1Q8WVX9 515 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 NEU4Q8WWR8 484 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 PRPF31Q8WWY3 499 aaKnown RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 KAT2BQ92831 832 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC22A18Q96BI1 424 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SAT2Q96F10 170 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 CFAP53Q96M91 514 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 APOL6Q9BWW8 343 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 C1QTNF3Q9BXJ4 246 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SIL1Q9H173 461 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 CXorf56Q9H5V9 222 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC35C2Q9NQQ7 365 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC6A13Q9NSD5 602 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 TAB2Q9NYJ8 693 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 FOXJ2Q9P0K8 574 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 ABI3Q9P2A4 366 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 CPSF2Q9P2I0 782 aaKnown RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC8A2Q9UPR5 921 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 SMC3Q9UQE7 1217 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 EPN1Q9Y6I3 576 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 AOX1Q06278 1338 aa3.15□□□□□ -1.91
MTHFD1-212ENST00000555858 CXorf65A6NEN9 183 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 FAM157AC9JC47 383 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 POC1B-GALNT4F8VUJ3 575 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 CTDSP2O14595 271 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 KIF1CO43896 1103 aaKnown RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 NDUFS3O75489 264 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF202O95125 648 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 NFATC1O95644 943 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 HSPA4LO95757 839 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 HNRNPCP07910 306 aaKnown RBP eCLIP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 CHRM5P08912 532 aaPredicted RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 KRT10P13645 584 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 SELLP14151 372 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ST6GAL1P15907 406 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF20P17024 532 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 YWHAQP27348 245 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 TACR3P29371 465 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 EEF1DP29692 281 aaKnown RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 HOXA13P31271 388 aaPredicted RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 CASQ1P31415 396 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 NRIP1P48552 1158 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 TDO2P48775 406 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 F2RL1P55085 397 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 RRP1P56182 461 aaKnown RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 HDAC4P56524 1084 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 KRT83P78385 493 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 DGCR2P98153 550 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 FOXI1Q12951 378 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 TNFAIP1Q13829 316 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 FGFBP1Q14512 234 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF169Q14929 603 aaPredicted RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 PCLAFQ15004 111 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ALG11Q2TAA5 492 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ASTE1Q2TB18 679 aaPredicted RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 C1orf141Q5JVX7 400 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 TBC1D9BQ66K14 1250 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 CRELD2Q6UXH1 353 aaPredicted RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 RBM44Q6ZP01 1051 aaKnown RBP3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 CCDC73Q6ZRK6 1079 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 DNAAF5Q86Y56 855 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 AVL9Q8NBF6 648 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 GPR150Q8NGU9 434 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 SGCDQ92629 289 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 PIGKQ92643 395 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 REPS1Q96D71 796 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ARHGEF26Q96DR7 871 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF503Q96F45 646 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 SPATA17Q96L03 361 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 FCRL5Q96RD9 977 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 BBS4Q96RK4 519 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 ADPGKQ9BRR6 497 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 KRTAP3-1Q9BYR8 98 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 HIPK3Q9H422 1215 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 PLEKHA4Q9H4M7 779 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 KIF9Q9HAQ2 790 aa3.14□□□□□ -1.91
MTHFD1-212ENST00000555858 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms