RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZNF366Q8N895 744 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 GLIS1Q8NBF1 620 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 OR2T3Q8NH03 318 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 TADA1Q96BN2 335 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 LRRC45Q96CN5 670 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 OSBPL1AQ9BXW6 950 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 MTG2Q9H4K7 406 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 ATP13A3Q9H7F0 1226 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 POLMQ9NP87 494 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-221ENST00000555773 ZDHHC4Q9NPG8 344 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 IL36AQ9UHA7 158 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 FAM153AQ9UHL3 310 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 EVLQ9UI08 416 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-221ENST00000555773 PPM1HQ9ULR3 514 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-221ENST00000555773 VCANP13611 3396 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 COL4A3Q01955 1670 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 ERI2A8K979 691 aaKnown RBP12.61□□□□□ -0.39
SHMT2-221ENST00000555773 NDC80O14777 642 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 TTI1O43156 1089 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 BNIP3LO60238 219 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 METTL18O95568 372 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 EPOP01588 193 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 SERPINA4P29622 427 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 ADCY8P40145 1251 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 DRG2P55039 364 aaKnown RBP12.61□□□□□ -0.39
SHMT2-221ENST00000555773 SKOR1P84550 965 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 SFSWAPQ12872 951 aaKnown RBP12.61□□□□□ -0.39
SHMT2-221ENST00000555773 GPS1Q13098 491 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 MPP3Q13368 585 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 TRIP13Q15645 432 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-221ENST00000555773 GDPD4Q6W3E5 623 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 PRPF39Q86UA1 669 aaKnown RBP12.61□□□□□ -0.39
SHMT2-221ENST00000555773 CHST14Q8NCH0 376 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 EXOC2Q96KP1 924 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 ERP44Q9BS26 406 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 RSPH9Q9H1X1 276 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-221ENST00000555773 ETNK1Q9HBU6 452 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 CD248Q9HCU0 757 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 RAB6BQ9NRW1 208 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 UTP11Q9Y3A2 253 aaKnown RBP12.61□□□□□ -0.39
SHMT2-221ENST00000555773 WASF2Q9Y6W5 498 aa12.61□□□□□ -0.39
SHMT2-221ENST00000555773 C1QTNF3-AMACRE9PGA6 284 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 TNFRSF10AO00220 468 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 HTRA2O43464 458 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 RAD51CO43502 376 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 SOCS5O75159 536 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 ALDH1A2O94788 518 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 DCNP07585 359 aaKnown RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 MMP2P08253 660 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 PSMB4P28070 264 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 CD86P42081 329 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 RPL26P61254 145 aaKnown RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 POLR2LP62875 67 aaKnown RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 CDK16Q00536 496 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 CCDC15Q0P6D6 951 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 SEMA5AQ13591 1074 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 GAS6Q14393 721 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 ARSIQ5FYB1 569 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 ZNF776Q68DI1 518 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 CWF19L1Q69YN2 538 aaKnown RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 KIAA1211LQ6NV74 962 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 PCGF5Q86SE9 256 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 PRUNE1Q86TP1 453 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 NOA1Q8NC60 698 aaKnown RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 BBOF1Q8ND07 529 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 SPATA22Q8NHS9 363 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 PBXIP1Q96AQ6 731 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 RBM15Q96T37 977 aaKnown RBP eCLIP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 LRRC1Q9BTT6 524 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 RAB17Q9H0T7 212 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 SUV39H2Q9H5I1 410 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 ZDHHC6Q9H6R6 413 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 DLGAP2Q9P1A6 1054 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 DKK3Q9UBP4 350 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 ASIC3Q9UHC3 531 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 SCML1Q9UN30 329 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 RPL26L1Q9UNX3 145 aaKnown RBP12.6□□□□□ -0.39
SHMT2-221ENST00000555773 RAI2Q9Y5P3 530 aa12.6□□□□□ -0.39
SHMT2-221ENST00000555773 TTC24A2A3L6 582 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 EFCAB8A8MWE9 144 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 E7EVH7 732 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 SMAPO00193 183 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 TRAFD1O14545 582 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 PI15O43692 258 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 LEFTY1O75610 366 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 PAPSS2O95340 614 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 ADH1BP00325 375 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 PDGFBP01127 241 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 ITIH2P19823 946 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 COL9A1P20849 921 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 MAGEA6P43360 314 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 TNNT3P45378 269 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 CXCL12P48061 93 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 CCR3P51677 355 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms