RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 OPHN1O60890 802 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 MTA2O94776 668 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 CTSKP43235 329 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 NOVA1P51513 510 aaKnown RBP13.86□□□□□ -0.19
SNX6-203ENST00000555416 TMEM259Q4ZIN3 620 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 KDM7AQ6ZMT4 941 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 ZSWIM9Q86XI8 627 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 PCDH19Q8TAB3 1148 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 LRRN4Q8WUT4 740 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 RAPGEF5Q92565 580 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 ZDHHC5Q9C0B5 715 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 FZD3Q9NPG1 666 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 AASDHPPTQ9NRN7 309 aa13.86□□□□□ -0.19
SNX6-203ENST00000555416 CABIN1Q9Y6J0 2220 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 SOWAHDA6NJG2 315 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 RAD51BO15315 384 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 MFSD11O43934 449 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 SH3BP5O60239 455 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 MAFKO60675 156 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 PALMO75781 387 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 PCDH8O95206 1070 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 MAP3K6O95382 1288 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 LCA5LO95447 670 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 IGSF6O95976 241 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 TIMP2P16035 220 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 FECHP22830 423 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 CD38P28907 300 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 MAN1A1P33908 653 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 IL9RQ01113 521 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 IL10RBQ08334 325 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 SLC10A7Q0GE19 358 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 KRT81Q14533 505 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 SHBQ15464 509 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 TEAD4Q15561 434 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 HADHQ16836 314 aaKnown RBP13.85□□□□□ -0.19
SNX6-203ENST00000555416 N4BP2L1Q5TBK1 243 aaPredicted RBP13.85□□□□□ -0.19
SNX6-203ENST00000555416 NCBP2-AS2Q69YL0 99 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 NAPEPLDQ6IQ20 393 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 FBXL19Q6PCT2 694 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 GDPD4Q6W3E5 623 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 PRPF39Q86UA1 669 aaKnown RBP13.85□□□□□ -0.19
SNX6-203ENST00000555416 HORMAD1Q86X24 394 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 SPATS2Q86XZ4 545 aaKnown RBP13.85□□□□□ -0.19
SNX6-203ENST00000555416 PGBD5Q8N414 524 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 PQLC3Q8N755 202 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 TMEM145Q8NBT3 493 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 RFFLQ8WZ73 363 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 PPP1R16AQ96I34 528 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 CALN1Q9BXU9 219 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 GOLPH3Q9H4A6 298 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 SP110Q9HB58 689 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 DONSONQ9NYP3 566 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 PCNX2A6NKB5 2137 aa13.85□□□□□ -0.19
SNX6-203ENST00000555416 TP53BP1Q12888 1972 aaPredicted RBP13.85□□□□□ -0.19
SNX6-203ENST00000555416 SPAARA0A1B0GVQ0 90 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 RCCD1A6NED2 376 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 C3orf70A6NLC5 250 aaPredicted RBP13.84□□□□□ -0.19
SNX6-203ENST00000555416 UPK3BL1B0FP48 263 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 UPK3BL2E5RIL1 263 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 AREL1O15033 823 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 CSRP1P21291 193 aaKnown RBP13.84□□□□□ -0.19
SNX6-203ENST00000555416 CLDN2P57739 230 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 SEMG2Q02383 582 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 SLC10A2Q12908 348 aaPredicted RBP13.84□□□□□ -0.19
SNX6-203ENST00000555416 TCEAL1Q15170 157 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 ANKRD20A8PQ5CZ79 823 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 FAM182AQ5T1J6 154 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 NEK5Q6P3R8 708 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 ADAT2Q7Z6V5 191 aaKnown RBP13.84□□□□□ -0.19
SNX6-203ENST00000555416 CAMK1DQ8IU85 385 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 LZTR1Q8N653 840 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 KCTD6Q8NC69 237 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 FAF2Q96CS3 445 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 LRIG1Q96JA1 1093 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 PANX2Q96RD6 677 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 CPEB1Q9BZB8 566 aaKnown RBP13.84□□□□□ -0.19
SNX6-203ENST00000555416 TM7SF3Q9NS93 570 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 RCOR3Q9P2K3 495 aaPredicted RBP13.84□□□□□ -0.19
SNX6-203ENST00000555416 SALL4Q9UJQ4 1053 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 INTUQ9ULD6 942 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 BTBD3Q9Y2F9 522 aa13.84□□□□□ -0.19
SNX6-203ENST00000555416 REXO2Q9Y3B8 237 aaKnown RBP13.84□□□□□ -0.19
SNX6-203ENST00000555416 TRPM6Q9BX84 2022 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 IGLON5A6NGN9 336 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 TLR4O00206 839 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 AP1G1O43747 822 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 CER1O95813 267 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 PRKCGP05129 697 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 KDELR1P24390 212 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 MAGEA1P43355 309 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 C21orf59P57076 290 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 NXPH1P58417 271 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 GBE1Q04446 702 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 LBRQ14739 615 aaKnown RBP13.83□□□□□ -0.2
SNX6-203ENST00000555416 ZNF423Q2M1K9 1284 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 SETMARQ53H47 684 aaPredicted RBP13.83□□□□□ -0.2
SNX6-203ENST00000555416 TMCO4Q5TGY1 634 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 RAD9BQ6WBX8 426 aa13.83□□□□□ -0.2
SNX6-203ENST00000555416 SRLQ86TD4 932 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms