RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 PDGFDQ9GZP0 370 aaPredicted RBP8.5□□□□□ -1.05
LINC00641-201ENST00000555379 IGFLR1Q9H665 355 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 PNPLA8Q9NP80 782 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 KLHL3Q9UH77 587 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 GGA2Q9UJY4 613 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 IRGMA1A4Y4 181 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 TBL1XO60907 577 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 LRRC36Q1X8D7 754 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 ZFP1Q6P2D0 407 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 RAD9BQ6WBX8 426 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 KIAA0408Q6ZU52 694 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 COLGALT2Q8IYK4 626 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 ZNF398Q8TD17 642 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 CD101Q93033 1021 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 APOPT1Q96IL0 206 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 ZFP14Q9HCL3 533 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 IMPAD1Q9NX62 359 aa8.5□□□□□ -1.05
LINC00641-201ENST00000555379 MATN2O00339 956 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ZBTB39O15060 712 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 POP4O95707 220 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ITGA2P17301 1181 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 HNRNPH3P31942 346 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ACLYP53396 1101 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 GRB14Q14449 540 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 CHI3L2Q15782 390 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 USP49Q70CQ1 688 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 PIGZQ86VD9 579 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 AGR3Q8TD06 166 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 SH2D3AQ9BRG2 576 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 RIBC2Q9H4K1 309 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 RBM12Q9NTZ6 932 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 MRPL39Q9NYK5 338 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 CCDC59Q9P031 241 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 PADI3Q9ULW8 664 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 SPEF1Q9Y4P9 236 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 TLL2Q9Y6L7 1015 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 C5orf60A6NFR6 353 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 LTA4HP09960 611 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 IDSP22304 550 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 MIPP30301 263 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 PPARDQ03181 441 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 SRSF11Q05519 484 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ACSM2AQ08AH3 577 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 CYTH1Q15438 398 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ATP13A4Q4VNC1 1196 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ACSM2BQ68CK6 577 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 SLC26A9Q7LBE3 791 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ZNF571Q7Z3V5 609 aaPredicted RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 GPSM1Q86YR5 675 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 GPR135Q8IZ08 494 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 KIAA0319LQ8IZA0 1049 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 CLEC4FQ8N1N0 589 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 SNX27Q96L92 541 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 C9orf72Q96LT7 481 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 MBOAT7Q96N66 472 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 POLD4Q9HCU8 107 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 VAV3Q9UKW4 847 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 CNTNAP1P78357 1384 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 RECQL5O94762 991 aaPredicted RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 STAU1O95793 577 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 GSTM1P09488 218 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 NQO1P15559 274 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 EPB42P16452 691 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 GABRR2P28476 465 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 GSTT1P30711 240 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 RAP1GAPP47736 663 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 GJA9P57773 515 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 COPZ1P61923 177 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 GSTM4Q03013 218 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 PPIDQ08752 370 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 C1DQ13901 141 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 LLGL1Q15334 1064 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 AMHR2Q16671 573 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 RFX8Q6ZV50 586 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 SLC47A2Q86VL8 602 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 SNX32Q86XE0 403 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 DRAXINQ8NBI3 349 aaPredicted RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 PAFAH2Q99487 392 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 TRIM51Q9BSJ1 452 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 SLC25A23Q9BV35 468 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ZDHHC6Q9H6R6 413 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ZFYVE1Q9HBF4 777 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 THAP1Q9NVV9 213 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 HMGXB4Q9UGU5 601 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ADGRE2Q9UHX3 823 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 AGO1Q9UL18 857 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 TMEM120BA0PK00 339 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 CCDC162PA2VCL2 907 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 EML1O00423 815 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ALBP02768 609 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 NUDT1P36639 197 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ZNF33AQ06730 810 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ST3GAL1Q11201 340 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 NEPROQ6NW34 567 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ARCQ7LC44 396 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 ANKS1BQ7Z6G8 1248 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 MILR1Q7Z6M3 343 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 FAM120BQ96EK7 910 aaKnown RBP8.49□□□□□ -1.05
LINC00641-201ENST00000555379 MYO19Q96H55 970 aa8.49□□□□□ -1.05
LINC00641-201ENST00000555379 NTPCRQ9BSD7 190 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms