RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 MYF6P23409 242 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 LMO2P25791 158 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 DPP6P42658 865 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 STT3AP46977 705 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PKNOX1P55347 436 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 NAA20P61599 178 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 TMEM62Q0P6H9 643 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 BTG3Q14201 252 aaPredicted RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PAFAH1B3Q15102 231 aaKnown RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 MOGQ16653 247 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 NHSL2Q5HYW2 709 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PPM1LQ5SGD2 360 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 NAPRTQ6XQN6 538 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 BNIPLQ7Z465 357 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PIGZQ86VD9 579 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 CLVS1Q8IUQ0 354 aaPredicted RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PDPRQ8NCN5 879 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 B3GALNT2Q8NCR0 500 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PNPT1Q8TCS8 783 aaKnown RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 CHPT1Q8WUD6 406 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 NT5C3BQ969T7 300 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 THAP11Q96EK4 314 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 MS4A4AQ96JQ5 239 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PARK7Q99497 189 aaKnown RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 CDHR5Q9HBB8 845 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 CD320Q9NPF0 282 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PFDN4Q9NQP4 134 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 ARMC1Q9NVT9 282 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 NSMCE4AQ9NXX6 385 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PIN4Q9Y237 131 aaKnown RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 COQ6Q9Y2Z9 468 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 HES2Q9Y543 173 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC30A1Q9Y6M5 507 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 A0A096LPK6 155 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 HEATR9A2RTY3 570 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 FUOMA2VDF0 154 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 TCAF2A6NFQ2 919 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PSMD12O00232 456 aaPredicted RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 TRIM24O15164 1050 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 SPTLC1O15269 473 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 CFLARO15519 480 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 GRID2O43424 1007 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 INHBBP09529 407 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 COL6A2P12110 1019 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 AKAP5P24588 427 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 LRPAP1P30533 357 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 BCAP31P51572 246 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 ZNF135P52742 658 aaPredicted RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 CRYBB1P53674 252 aaPredicted RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 ATXN1P54253 815 aaKnown RBP10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 NME5P56597 212 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 C21orf59P57076 290 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PSME3P61289 254 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 ZBTB17Q13105 803 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 SNX17Q15036 470 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 TGFBIQ15582 683 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 FAM110CQ1W6H9 321 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PPM1JQ5JR12 505 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 DCLRE1AQ6PJP8 1040 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 DCDC5Q6ZRR9 648 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 RNF139Q8WU17 664 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 ATP6V1E2Q96A05 226 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 ABHD8Q96I13 439 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 TSNARE1Q96NA8 513 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC2A13Q96QE2 648 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 NPY6RQ99463 290 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 LPIN3Q9BQK8 851 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 BRD8Q9H0E9 1235 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 TRPV6Q9H1D0 765 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 LRRC40Q9H9A6 602 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 LRRC4Q9HBW1 653 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 PSAT1Q9Y617 370 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 IQCA1LA6NCM1 817 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 BOLA2-SMG1P6H3BVE0 249 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 RNF103O00237 685 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 NCAM2O15394 837 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 DYNC1LI2O43237 492 aaPredicted RBP10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 SNAP91O60641 907 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 OCM2P0CE71 109 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 OCMP0CE72 109 aaPredicted RBP10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 HSPA8P11142 646 aaKnown RBP10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 NPR3P17342 541 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 PTPN1P18031 435 aaKnown RBP10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 TFEBP19484 476 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 MGAT1P26572 445 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 GRIA1P42261 906 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 POLD2P49005 469 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 CSRP3P50461 194 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 ADAM17P78536 824 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 GRSF1Q12849 480 aaKnown RBP eCLIP10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 IFRD2Q12894 506 aaPredicted RBP10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 MFSD10Q14728 455 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 NRF1Q16656 503 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 UBXN11Q5T124 520 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 FAM45BPQ6NSW5 357 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 ZBTB49Q6ZSB9 765 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 FAM131BQ86XD5 332 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 SIX6OS1Q8N1H7 587 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 FAM45AQ8TCE6 357 aa10.8□□□□□ -0.68
MTHFD1-210ENST00000555252 URGCPQ8TCY9 931 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms