RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 TMPRSS6Q8IU80 811 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 PLPP6Q8IY26 295 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 CCDC13Q8IYE1 715 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 MAML2Q8IZL2 1156 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-218ENST00000555213 OR2AP1Q8NGE2 309 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 HNRNPLLQ8WVV9 542 aaKnown RBP11.07□□□□□ -0.64
SHMT2-218ENST00000555213 RUBCNQ92622 972 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 FATE1Q969F0 183 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 SIPA1Q96FS4 1042 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 PPP1R16AQ96I34 528 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 MRGPRX1Q96LB2 322 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 RUNDC3BQ96NL0 473 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 TSGA13Q96PP4 275 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 TMEM121Q9BTD3 319 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 TM6SF2Q9BZW4 377 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 RSPH9Q9H1X1 276 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-218ENST00000555213 TNKS2Q9H2K2 1166 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 ZDHHC18Q9NUE0 388 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 POLR3BQ9NW08 1133 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-218ENST00000555213 ZNF446Q9NWS9 450 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 SCML1Q9UN30 329 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 SNX24Q9Y343 169 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 ZNF318Q5VUA4 2279 aa11.07□□□□□ -0.64
SHMT2-218ENST00000555213 PIEZO1Q92508 2521 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 BCLAF3A2AJT9 711 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 MCF2LO15068 1137 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 MAP3K6O95382 1288 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 IL1BP01584 269 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 TUBBP07437 444 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 FAM153BP0C7A2 387 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 RBP3P10745 1247 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 VAV1P15498 845 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 CCNCP24863 283 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 CNR2P34972 360 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 MMP13P45452 471 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 PXNP49023 591 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 FNTBP49356 437 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 CCNHP51946 323 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 COPAP53621 1224 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 EIF3EP60228 445 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 PPIDQ08752 370 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 CCDC15Q0P6D6 951 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 AP1B1Q10567 949 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 XRCC4Q13426 336 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 PTK6Q13882 451 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 GRM3Q14832 879 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 TRIP13Q15645 432 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 CST6Q15828 149 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 FAM153CQ494X1 144 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 DPY19L3Q6ZPD9 716 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 MMAAQ8IVH4 418 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 CDKL3Q8IVW4 592 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 IFT20Q8IY31 132 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 GSPT2Q8IYD1 628 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 STK40Q8N2I9 435 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 EIF1ADQ8N9N8 165 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 OR2A12Q8NGT7 310 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 GRIN3AQ8TCU5 1115 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 GANCQ8TET4 914 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 AENQ8WTP8 325 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 TFB1MQ8WVM0 346 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 PTPRN2Q92932 1015 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 LRIG1Q96JA1 1093 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 HEPHQ9BQS7 1158 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 TPSD1Q9BZJ3 242 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 MKRN2Q9H000 416 aaKnown RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 MTG2Q9H4K7 406 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 ZDHHC6Q9H6R6 413 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 CD248Q9HCU0 757 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 DYRK4Q9NR20 520 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 HECAQ9UBI9 543 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 IL36AQ9UHA7 158 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 FAM153AQ9UHL3 310 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 FEZ2Q9UHY8 353 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-218ENST00000555213 ZNF148Q9UQR1 794 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 NCKAP1Q9Y2A7 1128 aa11.06□□□□□ -0.64
SHMT2-218ENST00000555213 CCDC151A5D8V7 595 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 HACD1B0YJ81 288 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 MATN3O15232 486 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 RPP40O75818 363 aaKnown RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 STK10O94804 968 aaKnown RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 ECEL1O95672 775 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 POP4O95707 220 aaKnown RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 CD160O95971 181 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 KRT14P02533 472 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 CCNB1P14635 433 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 C5AR1P21730 350 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 RBL1P28749 1068 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 OXTRP30559 389 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 RPL22P35268 128 aaKnown RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 AP1S1P61966 158 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 RPS14P62263 151 aaKnown RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 HNRNPDQ14103 355 aaKnown RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 CFAP58Q5T655 872 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 SYDE1Q6ZW31 735 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 KBTBD6Q86V97 674 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 ZC3H18Q86VM9 953 aaKnown RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 PAF1Q8N7H5 531 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 TMIEQ8NEW7 156 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 PRSS33Q8NF86 280 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms