RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RLFQ13129 1914 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 GOLGA8QA0A0J9YX86 632 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 GOLGA8OA6NCC3 632 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 GOLGA8NF8WBI6 632 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 PAPSS1O43252 624 aaPredicted RBP15.82■□□□□ 0.12
SYNE3-203ENST00000554873 ASNA1O43681 348 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 GABBR2O75899 941 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 MICAL2O94851 1124 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 TNNC2P02585 160 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 PRKCBP05771 671 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 JUNBP17275 347 aaPredicted RBP15.82■□□□□ 0.12
SYNE3-203ENST00000554873 CNTN2Q02246 1040 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 BFSP2Q13515 415 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 TRNP1Q6NT89 227 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 CDR2LQ86X02 465 aaPredicted RBP15.82■□□□□ 0.12
SYNE3-203ENST00000554873 NIM1KQ8IY84 436 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 ESX1Q8N693 406 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 LRRN4Q8WUT4 740 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 TMA16Q96EY4 203 aaKnown RBP15.82■□□□□ 0.12
SYNE3-203ENST00000554873 ADPGKQ9BRR6 497 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 TEX13BQ9BXU2 312 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 RETREG1Q9H6L5 497 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 ATP13A3Q9H7F0 1226 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 CD320Q9NPF0 282 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 ADA2Q9NZK5 511 aa15.82■□□□□ 0.12
SYNE3-203ENST00000554873 TCRBV3S1A0A5B6 114 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 FAM159BA6NKW6 160 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 FYNP06241 537 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 NCAM1P13591 858 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 HLCSP50747 726 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 STAT5BP51692 787 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 ZNF143P52747 638 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 TSPY1Q01534 308 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 TNK2Q07912 1038 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 C15orf59Q2T9L4 293 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 FAM102AQ5T9C2 384 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 LINC00299Q6ZSB3 139 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 PLD5Q8N7P1 536 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 ZNF781Q8N8C0 355 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 RNF149Q8NC42 400 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 TP53INP1Q96A56 240 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 PBXIP1Q96AQ6 731 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 NRBF2Q96F24 287 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 RNF157Q96PX1 679 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 BCO2Q9BYV7 579 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 ELOVL4Q9GZR5 314 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 RNPEPQ9H4A4 650 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 CPNE5Q9HCH3 593 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 MAGEE1Q9HCI5 957 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 COPG2Q9UBF2 871 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 DCDC2Q9UHG0 476 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 SIX4Q9UIU6 781 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 PIK3R2O00459 728 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 MAP3K6O95382 1288 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 OSBPP22059 807 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 IL4RP24394 825 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 RBL1P28749 1068 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 PSMD8P48556 350 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 PRKAA2P54646 552 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 CSE1LP55060 971 aaKnown RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 PTPN11Q06124 597 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 LAMTOR4Q0VGL1 99 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 CDC20Q12834 499 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 PPIL2Q13356 520 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 TFDP2Q14188 446 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 ZNF667Q5HYK9 610 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 INTS11Q5TA45 600 aaKnown RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 NBPF12Q5TAG4 269 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 IRAK1BP1Q5VVH5 260 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 KCNT2Q6UVM3 1135 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 SNX29P2Q8IUI4 249 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 ZUFSPQ96AP4 578 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 ZNF668Q96K58 619 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 BEGAINQ9BUH8 593 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 NOL6Q9H6R4 1146 aaKnown RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 AURKAO14965 403 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 B4GALT4O60513 344 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 HSPA4LO95757 839 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 APRTP07741 180 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 IFNA8P32881 189 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 GPD2P43304 727 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 GNG2P59768 71 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 TRAP1Q12931 704 aaKnown RBP15.81■□□□□ 0.12
SYNE3-203ENST00000554873 ARHGEF6Q15052 776 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 TMTC4Q5T4D3 741 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 SLC22A16Q86VW1 577 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 CBR4Q8N4T8 237 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 UBA3Q8TBC4 463 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 RXFP2Q8WXD0 754 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 SNX19Q92543 992 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 CSF3RQ99062 836 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 PCDHAC1Q9H158 963 aa15.81■□□□□ 0.12
SYNE3-203ENST00000554873 SLC15A5A6NIM6 579 aa15.8■□□□□ 0.12
SYNE3-203ENST00000554873 DEAF1O75398 565 aaPredicted RBP15.8■□□□□ 0.12
SYNE3-203ENST00000554873 IL18RAPO95256 599 aa15.8■□□□□ 0.12
SYNE3-203ENST00000554873 KRT6AP02538 564 aa15.8■□□□□ 0.12
SYNE3-203ENST00000554873 KRT6BP04259 564 aa15.8■□□□□ 0.12
SYNE3-203ENST00000554873 UBA1P22314 1058 aaKnown RBP15.8■□□□□ 0.12
SYNE3-203ENST00000554873 ETFBP38117 255 aa15.8■□□□□ 0.12
SYNE3-203ENST00000554873 STX1BP61266 288 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms