RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 MMP10P09238 476 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 IFIT1P09914 478 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 WEE2P0C1S8 567 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 CYP19A1P11511 503 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 CYP4B1P13584 511 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PRF1P14222 555 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ARSAP15289 507 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ST6GAL1P15907 406 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 HOXB9P17482 250 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 GSTM2P28161 218 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 CHRNA5P30532 468 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MMP13P45452 471 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SOX2P48431 317 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 RPS6KA3P51812 740 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MVDP53602 400 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 OAZ1P54368 228 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TBL3Q12788 808 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TRIP6Q15654 476 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SLC4A8Q2Y0W8 1093 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MTFR2Q6P444 385 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SLC30A9Q6PML9 568 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF474Q6S9Z5 364 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF813Q6ZN06 617 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 RBM44Q6ZP01 1051 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MDGA2Q7Z553 956 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 HEATR4Q86WZ0 1026 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SCN4BQ8IWT1 228 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 VPS52Q8N1B4 723 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 NANOGP1Q8N7R0 232 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 EXD3Q8N9H8 876 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 FAM47BQ8NA70 645 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 OSR1Q8TAX0 266 aaPredicted RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 KAT2BQ92831 832 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SH3KBP1Q96B97 665 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 COQ8BQ96D53 544 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MPP4Q96JB8 637 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ADAD1Q96M93 576 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 ZNF347Q96SE7 839 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 WACQ9BTA9 647 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TM2D2Q9BX73 214 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 SLC26A6Q9BXS9 759 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MAF1Q9H063 256 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 VPS33BQ9H267 617 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TAOK3Q9H2K8 898 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 STN1Q9H668 368 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 UBN1Q9NPG3 1134 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TLR8Q9NR97 1041 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 TMEM184CQ9NVA4 438 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 CD207Q9UJ71 328 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 DTX4Q9Y2E6 619 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 GDAQ9Y2T3 454 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 PKP3Q9Y446 797 aa1.66□□□□□ -2.14
PRPF39-208ENST00000554785 VIRMAQ69YN4 1812 aaKnown RBP1.66□□□□□ -2.14
PRPF39-208ENST00000554785 KIAA0100Q14667 2235 aaKnown RBP1.65□□□□□ -2.14
PRPF39-208ENST00000554785 QRICH2Q9H0J4 1663 aa1.65□□□□□ -2.14
PRPF39-208ENST00000554785 C5orf42Q9H799 3197 aa1.65□□□□□ -2.14
PRPF39-208ENST00000554785 CNTNAP2Q9UHC6 1331 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 LY6G6EA0A0G2JKS1 128 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 SH2D7A6NKC9 451 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 CCNT1O60563 726 aaKnown RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 CD63P08962 238 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 HNRNPA1P09651 372 aaKnown RBP eCLIP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 DPEP1P16444 411 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 RPS6KB1P23443 525 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 PRKCHP24723 683 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 HOXA7P31268 230 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 ELF1P32519 619 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 DDIT3P35638 169 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 PSMC2P35998 433 aaKnown RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 PGM1P36871 562 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 LIFRP42702 1097 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 YPEL5P62699 121 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 ARHGAP8P85298 464 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 HSF1Q00613 529 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 FHL1Q13642 323 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF268Q14587 947 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 GXYLT1Q4G148 440 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 KLHL22Q53GT1 634 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 ARL13AQ5H913 290 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 C10orf76Q5T2E6 689 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 C10orf25Q5T742 122 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 RETSATQ6NUM9 610 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 LRRC8DQ7L1W4 858 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 RTL10Q7L3V2 364 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 GALNT7Q86SF2 657 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 PIP4P1Q86T03 277 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 BRSK2Q8IWQ3 736 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 PAQR4Q8N4S7 273 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 TSPYL6Q8N831 410 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 OR52N4Q8NGI2 321 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 FAM110DQ8TAY7 271 aaPredicted RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 BCAS4Q8TDM0 211 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 C2CD4CQ8TF44 421 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 ZFPM2Q8WW38 1151 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 MAP4K1Q92918 833 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 RNFT2Q96EX2 444 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 CAMK1GQ96NX5 476 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms