RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SERPINB7O75635 380 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 SEC31AO94979 1220 aaKnown RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 AGR2O95994 175 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 RETP07949 1114 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 HKR1P10072 659 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 GHRP10912 638 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 PDHBP11177 359 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 HPGDP15428 266 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 POU3F2P20265 443 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CRABP2P29373 138 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 PBLDP30039 288 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CDC25CP30307 473 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 KRT20P35900 424 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 ABCG1P45844 678 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 HSPA13P48723 471 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 TMED10P49755 219 aaKnown RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MAP3K7CLP57077 242 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 GSDMDP57764 484 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 PHC1P78364 1004 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 TMPRSS15P98073 1019 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CDK18Q07002 472 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MYO1EQ12965 1108 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 VGLL4Q14135 290 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MORC3Q14149 939 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CNGA2Q16280 664 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 P3H1Q32P28 736 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 TWISTNBQ3B726 338 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 LEXMQ3ZCV2 418 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 ACCSLQ4AC99 568 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 LACTB2Q53H82 288 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 KRBOX4Q5JUW0 171 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 TMEM31Q5JXX7 168 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 FAM83BQ5T0W9 1011 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 GPR158Q5T848 1215 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 AADACL4Q5VUY2 407 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 C17orf99Q6UX52 265 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 C16orf86Q6ZW13 317 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 BNIPLQ7Z465 357 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 SYTL1Q8IYJ3 562 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 SPICE1Q8N0Z3 855 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CAMKK1Q8N5S9 505 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 ANKRD42Q8N9B4 389 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 SIMC1Q8NDZ2 872 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 LINS1Q8NG48 757 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CFAP61Q8NHU2 1237 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 BCAS4Q8TDM0 211 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 NOC3LQ8WTT2 800 aaKnown RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 STARD8Q92502 1023 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 SLC9A6Q92581 669 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 TFAP2CQ92754 450 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 AZIN2Q96A70 460 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 RMDN1Q96DB5 314 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 TMA16Q96EY4 203 aaKnown RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 ATP6V1G3Q96LB4 118 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 FAM20AQ96MK3 541 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 JAKMIP1Q96N16 626 aaKnown RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 ZNF570Q96NI8 536 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 RPRD1AQ96P16 312 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 HAPLN3Q96S86 360 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 C7orf25Q9BPX7 421 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 SLF1Q9BQI6 1058 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MXD3Q9BW11 206 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CCSER1Q9C0I3 900 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.55□□□□□ -1.681e-11■■■■□ 25.2
ATXN3-227ENST00000554491 CDH19Q9H159 772 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CARD9Q9H257 536 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 RAD21L1Q9H4I0 556 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 EHD1Q9H4M9 534 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 HAUS4Q9H6D7 363 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 WDR26Q9H7D7 661 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 FAM204AQ9H8W3 233 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 SLC38A10Q9HBR0 1119 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 NOD2Q9HC29 1040 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 SMYD2Q9NRG4 433 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 C9orf78Q9NZ63 289 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 ZNF624Q9P2J8 865 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MALT1Q9UDY8 824 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CPA4Q9UI42 421 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CLEC4AQ9UMR7 237 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 AGAP1Q9UPQ3 857 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CHMP2BQ9UQN3 213 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CAB39Q9Y376 341 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 L3MBTL1Q9Y468 752 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 MTF2Q9Y483 593 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 USP15Q9Y4E8 981 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-227ENST00000554491 INSL6Q9Y581 213 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 NOX1Q9Y5S8 564 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 CACNA1BQ00975 2339 aa4.55□□□□□ -1.68
ATXN3-227ENST00000554491 RLFQ13129 1914 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 GBF1Q92538 1859 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 SALL3Q9BXA9 1300 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 A0A088AWK7 358 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 A0A0J9YVX5 310 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 TMEM114B3SHH9 223 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 DIRC3C9JPN6 131 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 E7ENQ6 273 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 GOLGA8SH3BPF8 625 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 MAPK13O15264 365 aa4.54□□□□□ -1.68
ATXN3-227ENST00000554491 HOXC11O43248 304 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms