RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 RNF25Q96BH1 459 aaPredicted RBP13.96□□□□□ -0.17
NUMB-209ENST00000554315 KLHL32Q96NJ5 620 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 TSGA10Q9BZW7 698 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 BRD8Q9H0E9 1235 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 SUV39H2Q9H5I1 410 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 ATP13A3Q9H7F0 1226 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 KLHL11Q9NVR0 708 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 LHX3Q9UBR4 397 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 CDV3Q9UKY7 258 aaKnown RBP13.96□□□□□ -0.17
NUMB-209ENST00000554315 DMTF1Q9Y222 760 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 REXO2Q9Y3B8 237 aaKnown RBP13.96□□□□□ -0.17
NUMB-209ENST00000554315 HYOU1Q9Y4L1 999 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 DUSP10Q9Y6W6 482 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 FRYLO94915 3013 aa13.96□□□□□ -0.17
NUMB-209ENST00000554315 WDR87Q6ZQQ6 2873 aa13.96□□□□□ -0.18
NUMB-209ENST00000554315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 A0A1W2PQ67 120 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 RCCD1A6NED2 376 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 APOL1O14791 398 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 TSPAN6O43657 245 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 RNGTTO60942 597 aaKnown RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 NEBLO76041 1014 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 PCDH8O95206 1070 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 UGT2B4P06133 528 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 ADRB3P13945 408 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 XPAP23025 273 aaPredicted RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 GARSP41250 739 aaKnown RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 NR2C2P49116 596 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 METAP1P53582 386 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 RACK1P63244 317 aaKnown RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 GALNT2Q10471 571 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 SLC45A4Q5BKX6 768 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 IL27RAQ6UWB1 636 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 ARHGAP36Q6ZRI8 547 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 TRIM69Q86WT6 500 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 RFX6Q8HWS3 928 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 KATNAL2Q8IYT4 538 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 TSEN2Q8NCE0 465 aaKnown RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 CCNYQ8ND76 341 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 OR6K2Q8NGY2 324 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 EXD1Q8NHP7 514 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 RBM41Q96IZ5 413 aaKnown RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 LACRTQ9GZZ8 138 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 SMOC1Q9H4F8 434 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 CAPN10Q9HC96 672 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 AMACRQ9UHK6 382 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 TFR2Q9UP52 801 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 CHD5Q8TDI0 1954 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 NUP205Q92621 2012 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 GON4LQ3T8J9 2241 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 CCDC66A2RUB6 948 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 PATE3B3GLJ2 98 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 PLK4O00444 970 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 NEMP1O14524 444 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 ARHGAP33O14559 1287 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 MATN3O15232 486 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 LATO43561 262 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 KRT86O43790 486 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 IGHV4-34P06331 123 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 SERPINA4P29622 427 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 SCNN1BP51168 640 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 COPS2P61201 443 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 AP1S1P61966 158 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 RPS21P63220 83 aaKnown RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 BCL2L1Q07817 233 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 SLC10A7Q0GE19 358 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 PDK1Q15118 436 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 SETMARQ53H47 684 aaPredicted RBP13.95□□□□□ -0.18
NUMB-209ENST00000554315 SLC9A4Q6AI14 798 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 BRAT1Q6PJG6 821 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 LRRC8AQ8IWT6 810 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 PQLC3Q8N755 202 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 PAF1Q8N7H5 531 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 NETO2Q8NC67 525 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 TMEM9BQ9NQ34 198 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 SALL4Q9UJQ4 1053 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 PCDHA3Q9Y5H8 950 aa13.95□□□□□ -0.18
NUMB-209ENST00000554315 ATXN2Q99700 1313 aaKnown RBP13.94□□□□□ -0.18
NUMB-209ENST00000554315 C3orf70A6NLC5 250 aaPredicted RBP13.94□□□□□ -0.18
NUMB-209ENST00000554315 MAGEC1O60732 1142 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 NFKBIAP25963 317 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 GKP32189 559 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 MMP13P45452 471 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.18
NUMB-209ENST00000554315 STAT4Q14765 748 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 TFDP3Q5H9I0 405 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 KIAA1161Q6NSJ0 714 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 ADAT2Q7Z6V5 191 aaKnown RBP13.94□□□□□ -0.18
NUMB-209ENST00000554315 HORMAD1Q86X24 394 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 TP53INP2Q8IXH6 220 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 ZCCHC9Q8N567 271 aaKnown RBP13.94□□□□□ -0.18
NUMB-209ENST00000554315 C1orf216Q8TAB5 229 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 FAM174AQ8TBP5 190 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 RTKNQ9BST9 563 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 EDEM2Q9BV94 578 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 TM9SF3Q9HD45 589 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 AMFRQ9UKV5 643 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 HEY1Q9Y5J3 304 aa13.94□□□□□ -0.18
NUMB-209ENST00000554315 FADS3Q9Y5Q0 445 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms