RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 FBXL19Q6PCT2 694 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 LAYNQ6UX15 382 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 IQCHQ86VS3 1027 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 HORMAD1Q86X24 394 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 REXO1L1PQ8IX06 675 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 LZTR1Q8N653 840 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 NPWQ8N729 165 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 OR6K2Q8NGY2 324 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 HSPH1Q92598 858 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 RAB7BQ96AH8 199 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 CELF6Q96J87 481 aaKnown RBP13.26□□□□□ -0.29
SHMT2-211ENST00000554310 BTBD6Q96KE9 485 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 CCDC42Q96M95 316 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 SP110Q9HB58 689 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 RCOR3Q9P2K3 495 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-211ENST00000554310 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 PCDHGB2Q9Y5G2 931 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 SNX11Q9Y5W9 270 aa13.26□□□□□ -0.29
SHMT2-211ENST00000554310 TRPM6Q9BX84 2022 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 A0A1W2PQU0 124 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 A0A1W2PR77 199 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 PRAMEF26H0Y7S4 382 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 RNF103O00237 685 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 DYNC1I1O14576 645 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 AP1G1O43747 822 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 DFNA5O60443 496 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 PROSCO94903 275 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 UGT2B4P06133 528 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 TMEM253P0C7T8 217 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 MAT2AP31153 395 aaKnown RBP13.25□□□□□ -0.29
SHMT2-211ENST00000554310 MAN1A1P33908 653 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 CCT8P50990 548 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 PAPOLAP51003 745 aaKnown RBP13.25□□□□□ -0.29
SHMT2-211ENST00000554310 OVGP1Q12889 678 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 ZNF423Q2M1K9 1284 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 ATXN7L2Q5T6C5 722 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-211ENST00000554310 KIAA1161Q6NSJ0 714 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 TMCO3Q6UWJ1 677 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 POLNQ7Z5Q5 900 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 TMTC1Q8IUR5 882 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 NAXDQ8IW45 347 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 ARHGAP12Q8IWW6 846 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 MFSD2AQ8NA29 543 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 CSPG4P5Q96PW8 444 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 PACSIN1Q9BY11 444 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 SLC39A8Q9C0K1 460 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 NHEJ1Q9H9Q4 299 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-211ENST00000554310 IL21RQ9HBE5 538 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 PCDH18Q9HCL0 1135 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 TM7SF3Q9NS93 570 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 PPP2R2CQ9Y2T4 447 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 MFHAS1Q9Y4C4 1052 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 DOCK9Q9BZ29 2069 aa13.25□□□□□ -0.29
SHMT2-211ENST00000554310 C16orf96A6NNT2 1141 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 DFFAO00273 331 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 RIOK3O14730 519 aaKnown RBP13.24□□□□□ -0.29
SHMT2-211ENST00000554310 GIPC1O14908 333 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 FLRT2O43155 660 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 MAGEC1O60732 1142 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 PCDH8O95206 1070 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 WNT1P04628 370 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 GKP32189 559 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 SERPINB6P35237 376 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
SHMT2-211ENST00000554310 IL10RBQ08334 325 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 KRT81Q14533 505 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 RFTN1Q14699 578 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-211ENST00000554310 GRM3Q14832 879 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
SHMT2-211ENST00000554310 ZNF284Q2VY69 593 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 TMEM259Q4ZIN3 620 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 N4BP2L1Q5TBK1 243 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-211ENST00000554310 TXNRD3NBQ6F5E7 133 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 GDPD4Q6W3E5 623 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 TMEM145Q8NBT3 493 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 KIF18AQ8NI77 898 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 TSC1Q92574 1164 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 VOPP1Q96AW1 172 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 CHP1Q99653 195 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 CPEB1Q9BZB8 566 aaKnown RBP13.24□□□□□ -0.29
SHMT2-211ENST00000554310 GDF3Q9NR23 364 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 DKK3Q9UBP4 350 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 FADS3Q9Y5Q0 445 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 EPG5Q9HCE0 2579 aa13.24□□□□□ -0.29
SHMT2-211ENST00000554310 ANKRD36A6QL64 1941 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 H0Y8X5 98 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 J3KR12 359 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 WNT9AO14904 365 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 YKT6O15498 198 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 TSPAN6O43657 245 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 SH3BP5O60239 455 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 PCDHGA12O60330 932 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 HNRNPA2B1P22626 353 aaKnown RBP13.23□□□□□ -0.29
SHMT2-211ENST00000554310 PMLP29590 882 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 AKT2P31751 481 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 ABL2P42684 1182 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 CDH6P55285 790 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 NXPH1P58417 271 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 RPS21P63220 83 aaKnown RBP13.23□□□□□ -0.29
SHMT2-211ENST00000554310 CYTH1Q15438 398 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms