RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CASC4Q6P4E1 433 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 C22orf39Q6P5X5 142 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 HDXQ7Z353 690 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 PRPF39Q86UA1 669 aaKnown RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 C12orf40Q86WS4 652 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 CCNJLQ8IV13 435 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 PALM2Q8IXS6 379 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 NDUFAF2Q8N183 169 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 OR2AP1Q8NGE2 309 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 ARRDC2Q8TBH0 407 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 PYROXD1Q8WU10 500 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 MSANTD3Q96H12 275 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 OXNAD1Q96HP4 312 aaPredicted RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 SERPINB12Q96P63 405 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 NAT9Q9BTE0 207 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 MLPHQ9BV36 600 aaPredicted RBP10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 FICDQ9BVA6 458 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 TM6SF2Q9BZW4 377 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 ACBD3Q9H3P7 528 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 ATP13A3Q9H7F0 1226 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 NOD2Q9HC29 1040 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 LHX3Q9UBR4 397 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 PRKAG3Q9UGI9 489 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 SUN2Q9UH99 717 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 ACTL7AQ9Y615 435 aa10.59□□□□□ -0.71
TMEM55B-205ENST00000554028 A0A1W2PQ67 120 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 ARNTLO00327 626 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 NPC1O15118 1278 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 MUSKO15146 869 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 ALOX15BO15296 676 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 TP73O15350 636 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 SMAD6O43541 496 aaKnown RBP10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 AGTP01019 485 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 HLA-DPA1P20036 260 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 SERPINA4P29622 427 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 PHBP35232 272 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 STK19P49842 368 aaPredicted RBP10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 GALK1P51570 392 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 EPHB1P54762 984 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 SESN2P58004 480 aaPredicted RBP10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 SKOR1P84550 965 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 GRSF1Q12849 480 aaKnown RBP eCLIP10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 GAB4Q2WGN9 574 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 MYLK3Q32MK0 819 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 CCDC38Q502W7 563 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 SPDYCQ5MJ68 293 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 SDE2Q6IQ49 451 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 NCEH1Q6PIU2 408 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 KDELC1Q6UW63 502 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 KDELC2Q7Z4H8 507 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 TMC3Q7Z5M5 1100 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 RNF135Q8IUD6 432 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 RELL1Q8IUW5 271 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 KLHDC8BQ8IXV7 354 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 ZBED8Q8IZ13 594 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 OR52K1Q8NGK4 314 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 CYB5D2Q8WUJ1 264 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 UBLCP1Q8WVY7 318 aaPredicted RBP10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 FEM1CQ96JP0 617 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 EXOC2Q96KP1 924 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 TUBGCP5Q96RT8 1024 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 CCDC77Q9BR77 488 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 IL22Q9GZX6 179 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 TNKS2Q9H2K2 1166 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 CASS4Q9NQ75 786 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 HECAQ9UBI9 543 aaPredicted RBP10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 SLCO3A1Q9UIG8 710 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 MAD1L1Q9Y6D9 718 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 PIAS3Q9Y6X2 628 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 SZT2Q5T011 3432 aa10.58□□□□□ -0.72
TMEM55B-205ENST00000554028 LOC730098B7Z3J9 87 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 PRRT4C9JH25 899 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 SPECC1L-ADORA2AF8WAN1 911 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 MAN2B1O00754 1011 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 SOCS5O75159 536 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 USP12O75317 370 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 SPAG6O75602 509 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 NDST3O95803 873 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 FGF1P05230 155 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 MMP2P08253 660 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 SRFP11831 508 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 ALADP13716 330 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 IL9P15248 144 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 TSHRP16473 764 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 CR2P20023 1033 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 DRD1P21728 446 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 NFKBIAP25963 317 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 CBLBQ13191 982 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 DGKKQ5KSL6 1271 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 FNBP1LQ5T0N5 605 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 ATXN7L2Q5T6C5 722 aaPredicted RBP10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 ARMC12Q5T9G4 340 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 ARMC3Q5W041 872 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 TMEM215Q68D42 235 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 DENND2CQ68D51 928 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 SERPINA13PQ6UXR4 307 aa10.57□□□□□ -0.72
TMEM55B-205ENST00000554028 RANBP10Q6VN20 620 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms