RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TUBP50607 506 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 PAPOLAP51003 745 aaKnown RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 NUDT6P53370 316 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 CLNS1AP54105 237 aaKnown RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 ACSM2AQ08AH3 577 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 TRPC3Q13507 836 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 SLC12A1Q13621 1099 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 GALNT3Q14435 633 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 SPATA1Q5VX52 437 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 WDR93Q6P2C0 686 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 AAGABQ6PD74 315 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 KLHL17Q6TDP4 642 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 ENOSF1Q7L5Y1 443 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 KRT77Q7Z794 578 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 ANKRD23Q86SG2 305 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 MOGAT3Q86VF5 341 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 SNX32Q86XE0 403 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 KRTAP7-1Q8IUC3 87 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 RASGRP3Q8IV61 690 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 FTSJ3Q8IY81 847 aaKnown RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 RNF152Q8N8N0 203 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 DBF4BQ8NFT6 615 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 OR14A16Q8NHC5 309 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 CTCFLQ8NI51 663 aaPredicted RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 FAR2Q96K12 515 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 COG8Q96MW5 612 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 PRPF18Q99633 342 aaKnown RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 FRMD8Q9BZ67 464 aaPredicted RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 SH3GLB2Q9NR46 395 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 SMYD2Q9NRG4 433 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 ANKEF1Q9NU02 776 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 ORC3Q9UBD5 711 aaPredicted RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 IL36RNQ9UBH0 155 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 GJD2Q9UKL4 321 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 GPR34Q9UPC5 381 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 GAB2Q9UQC2 676 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 TNFSF13BQ9Y275 285 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 UBE2J1Q9Y385 318 aaPredicted RBP2.48□□□□□ -2.01
SRP54-204ENST00000553923 PCDHB7Q9Y5E2 793 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 SLC4A4Q9Y6R1 1079 aa2.48□□□□□ -2.01
SRP54-204ENST00000553923 FAM170AA1A519 330 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 STMND1H3BQB6 276 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 J3KTA2 159 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 TULP2O00295 520 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 MSI1O43347 362 aaKnown RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 ASNA1O43681 348 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 LMX1BO60663 402 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 RTN3O95197 1032 aaPredicted RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 STARD3NLO95772 234 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 AKR1B1P15121 316 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 ANOS1P23352 680 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 ACTN2P35609 894 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 SERPINF1P36955 418 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 THPOP40225 353 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 ADPRHP54922 357 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 DRG2P55039 364 aaKnown RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 CSHL1Q14406 222 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 TAF11Q15544 211 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 HLFQ16534 295 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 MAPKAPK3Q16644 382 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 CCDC92Q53HC0 331 aaPredicted RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 FBXO47Q5MNV8 452 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 STPG1Q5TH74 334 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 CCDC129Q6ZRS4 1044 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 GALNT5Q7Z7M9 940 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 MYPOPQ86VE0 399 aaPredicted RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 CHD1LQ86WJ1 897 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 CCDC117Q8IWD4 279 aaPredicted RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 CHCHD4Q8N4Q1 142 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 ANKRD52Q8NB46 1076 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 ADPRHL1Q8NDY3 354 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 SPATA20Q8TB22 786 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 HTRA1Q92743 480 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 ZUFSPQ96AP4 578 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 HVCN1Q96D96 273 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 ADAD1Q96M93 576 aaKnown RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 GDF15Q99988 308 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 KATNAL1Q9BW62 490 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 ABHD16BQ9H3Z7 469 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 TAF1DQ9H5J8 278 aaPredicted RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 SEPSECSQ9HD40 501 aaKnown RBP2.47□□□□□ -2.01
SRP54-204ENST00000553923 SAYSD1Q9NPB0 183 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 FSCN3Q9NQT6 498 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 HAUS2Q9NVX0 235 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 RGL1Q9NZL6 768 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 SLC13A4Q9UKG4 626 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 FBXO4Q9UKT5 387 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 TMEM98Q9Y2Y6 226 aa2.47□□□□□ -2.01
SRP54-204ENST00000553923 LOC105369274A0A096LPK9 316 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 LOC102723532A0A0G2JNH3 316 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 PNMA6EA0A0J9YXQ4 647 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 PABPN1LA6NDY0 278 aaKnown RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 PRAC2D3DTV9 90 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 AP3D1O14617 1153 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 HNRNPDLO14979 420 aaKnown RBP2.46□□□□□ -2.02
SRP54-204ENST00000553923 P4HA2O15460 535 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 ASAP2O43150 1006 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 KCNJ13O60928 360 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 KRT38O76015 456 aa2.46□□□□□ -2.02
SRP54-204ENST00000553923 DNTTP04053 509 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms