RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 LAYNQ6UX15 382 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 TMTC1Q8IUR5 882 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 RHOT2Q8IXI1 618 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 CCDC170Q8IYT3 715 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 ZCCHC9Q8N567 271 aaKnown RBP8.33□□□□□ -1.08
RDH11-205ENST00000553816 PQLC3Q8N755 202 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 TMIEQ8NEW7 156 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 CADM4Q8NFZ8 388 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 OR2I1PQ8NGU4 316 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 PCDH19Q8TAB3 1148 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 SNX19Q92543 992 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 FOXJ1Q92949 421 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 ISG20Q96AZ6 181 aaKnown RBP8.33□□□□□ -1.08
RDH11-205ENST00000553816 HEPHQ9BQS7 1158 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 TRPM6Q9BX84 2022 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 LACRTQ9GZZ8 138 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 MIR1-1HGQ9H1L0 117 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 CAPN10Q9HC96 672 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 EVLQ9UI08 416 aaPredicted RBP8.33□□□□□ -1.08
RDH11-205ENST00000553816 FZD4Q9ULV1 537 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 HPCAL4Q9UM19 191 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 NCKAP1Q9Y2A7 1128 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 DUSP10Q9Y6W6 482 aa8.33□□□□□ -1.08
RDH11-205ENST00000553816 DMXL1Q9Y485 3027 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 CXorf51AA0A1B0GTR3 108 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 ZSCAN5CA6NGD5 496 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 C3orf70A6NLC5 250 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 MEI4A8MW99 385 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 C1QTNF3-AMACRE9PGA6 284 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 KHNYNO15037 678 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 SPINT1O43278 529 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 PLRG1O43660 514 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 MFSD11O43934 449 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 BUB1BO60566 1050 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 PEX11BO96011 259 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 GSRP00390 522 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 PRNPP04156 253 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 CFIP05156 583 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 UGT2B4P06133 528 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 TNNT1P13805 278 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 ENGP17813 658 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 ITIH2P19823 946 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 COMTP21964 271 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 KDELR1P24390 212 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 MAT2AP31153 395 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 ARHGAP25P42331 645 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 RECQLP46063 649 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 NOP2P46087 812 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 MARCKSL1P49006 195 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 ZNF135P52742 658 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 HADHBP55084 474 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 RHOAP61586 193 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 SNRPD1P62314 119 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 LMNB2Q03252 620 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 SLC10A7Q0GE19 358 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 SLC10A2Q12908 348 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 DUOXA1Q1HG43 343 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 MYLK3Q32MK0 819 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 INO80DQ53TQ3 878 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 LRRC73Q5JTD7 316 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 SYCP2LQ5T4T6 812 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 FAM46CQ5VWP2 391 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 KIAA0895LQ68EN5 471 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 NCBP2-AS2Q69YL0 99 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 TMCO3Q6UWJ1 677 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 PARS2Q7L3T8 475 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 DSG4Q86SJ6 1040 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 PGBD5Q8N414 524 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 RYBPQ8N488 228 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 LZTR1Q8N653 840 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 GPR161Q8N6U8 529 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 C12orf50Q8NA57 414 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 KCTD6Q8NC69 237 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 TSEN2Q8NCE0 465 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 OR2AP1Q8NGE2 309 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 OR2T34Q8NGX1 318 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 FAF2Q96CS3 445 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 CCDC114Q96M63 670 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 KLHL32Q96NJ5 620 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 BAG1Q99933 345 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 DESI2Q9BSY9 194 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 EDEM2Q9BV94 578 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 CALN1Q9BXU9 219 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 UBA2Q9UBT2 640 aaPredicted RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 IPO11Q9UI26 975 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 GGT7Q9UJ14 662 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 ZFR2Q9UPR6 939 aaKnown RBP8.32□□□□□ -1.08
RDH11-205ENST00000553816 ALG6Q9Y672 507 aa8.32□□□□□ -1.08
RDH11-205ENST00000553816 TBC1D3DA0A087WVF3 549 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 TBC1D3IA0A087WXS9 549 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 TBC1D3EA0A087X179 549 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 TBC1D3KA0A087X1G2 549 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 A0A1W2PPC4 97 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 DCDC2BA2VCK2 349 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 TBC1D3FA6NER0 549 aaPredicted RBP8.31□□□□□ -1.08
RDH11-205ENST00000553816 C16orf96A6NNT2 1141 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 C4orf47A7E2U8 309 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 TBC1D3LB9A6J9 549 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 KRIT1O00522 736 aa8.31□□□□□ -1.08
RDH11-205ENST00000553816 TM4SF5O14894 197 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms