RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ZMPSTE24O75844 475 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ACADMP11310 421 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 TDGF1P13385 188 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 SERPINB6P35237 376 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 RECQLP46063 649 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 SERPINH1P50454 418 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ATP1A2P50993 1020 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 GUCY1A3Q02108 690 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 LMNB2Q03252 620 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 CAMK2GQ13555 558 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ZNF528Q3MIS6 628 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 POM121L1PQ3SYA9 428 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 CCDC38Q502W7 563 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 C9orf64Q5T6V5 341 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 C22orf39Q6P5X5 142 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ZC3H14Q6PJT7 736 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 MFSD7Q6UXD7 560 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ARHGAP36Q6ZRI8 547 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 BZW1Q7L1Q6 419 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 LONP2Q86WA8 852 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 MMAAQ8IVH4 418 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ARHGAP12Q8IWW6 846 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 IFT20Q8IY31 132 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 CACNA2D3Q8IZS8 1091 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 SYCE1Q8N0S2 351 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 STK40Q8N2I9 435 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 LZTR1Q8N653 840 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 LRRC57Q8N9N7 239 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 SPATA4Q8NEY3 305 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 OR2T3Q8NH03 318 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 GANCQ8TET4 914 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 PRCCQ92733 491 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 SPDL1Q96EA4 605 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 MRGPRX1Q96LB2 322 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 FAM126AQ9BYI3 521 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 TM6SF2Q9BZW4 377 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 NOD2Q9HC29 1040 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 GDF3Q9NR23 364 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 RNF14Q9UBS8 474 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 DMGDHQ9UI17 866 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 HEY1Q9Y5J3 304 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 NUMA1Q14980 2115 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ZSCAN5CA6NGD5 496 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 C3orf70A6NLC5 250 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 E7EVH7 732 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 APOL1O14791 398 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ATP9BO43861 1147 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 IL1BP01584 269 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 KRT10P13645 584 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 PSMD8P48556 350 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 GEMIN4P57678 1058 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ELF3P78545 371 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 LPAL2Q16609 132 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 USP39Q53GS9 565 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 NCBP2-AS2Q69YL0 99 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 CAPRIN2Q6IMN6 1127 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 SPOCD1Q6ZMY3 1216 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 PRR23BQ6ZRT6 265 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 CEP68Q76N32 757 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 NT5DC3Q86UY8 548 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 FAM124AQ86V42 546 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 KATNAL2Q8IYT4 538 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 RCOR2Q8IZ40 523 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 ATPAF2Q8N5M1 289 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 RNF10Q8N5U6 811 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 PQLC3Q8N755 202 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 KDM1BQ8NB78 822 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 OR6K2Q8NGY2 324 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 GRIN3AQ8TCU5 1115 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 FRS2Q8WU20 508 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 LRRN4Q8WUT4 740 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 PTPRN2Q92932 1015 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 RNF157Q96PX1 679 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 LRRC1Q9BTT6 524 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 IRF2BPLQ9H1B7 796 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 KCNH6Q9H252 994 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 CD93Q9NPY3 652 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 UBA2Q9UBT2 640 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 EBF1Q9UH73 591 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 IPO11Q9UI26 975 aaKnown RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 CYP8B1Q9UNU6 501 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-234ENST00000552645 PCDHGA2Q9Y5H1 932 aa10.11□□□□□ -0.79
LETMD1-234ENST00000552645 WDR87Q6ZQQ6 2873 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 ANKRD36A6QL64 1941 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 EME2A4GXA9 379 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-234ENST00000552645 MAP3K13O43283 966 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 RPP40O75818 363 aaKnown RBP10.1□□□□□ -0.79
LETMD1-234ENST00000552645 TMCC1O94876 653 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 DNTTP04053 509 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 HOXA6P31267 233 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 CTNNA1P35221 906 aaKnown RBP10.1□□□□□ -0.79
LETMD1-234ENST00000552645 HSPA9P38646 679 aaKnown RBP10.1□□□□□ -0.79
LETMD1-234ENST00000552645 COPAP53621 1224 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 RHOAP61586 193 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 GBE1Q04446 702 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 ELAVL3Q14576 367 aaKnown RBP10.1□□□□□ -0.79
LETMD1-234ENST00000552645 ATXN7L2Q5T6C5 722 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms