RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 CNTN4Q8IWV2 1026 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SLC25A41Q8N5S1 370 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 WFDC5Q8TCV5 224 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 TRIB3Q96RU7 358 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 RANBP9Q96S59 729 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 RBBP8Q99708 897 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 PAIP2Q9BPZ3 127 aaKnown RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SPON2Q9BUD6 331 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 VPS11Q9H270 941 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 C20orf96Q9NUD7 363 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SLC2A6Q9UGQ3 507 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 PLLPQ9Y342 182 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 RWDD3Q9Y3V2 267 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 CCDC78A2IDD5 438 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 GOLGA8TH3BQL2 631 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 COPEO14579 308 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 GRM6O15303 877 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SNX3O60493 162 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 TBL1XO60907 577 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SIN3BO75182 1162 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 LUC7L3O95232 432 aaKnown RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 TOP3BO95985 862 aaKnown RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 EPOP01588 193 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 CKMP06732 381 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 ALADP13716 330 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 PFKLP17858 780 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 MZF1P28698 734 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 HNRNPH1P31943 449 aaKnown RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 CRHR1P34998 444 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SERPINH1P50454 418 aaKnown RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 CSRP3P50461 194 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 LIMK2P53671 638 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 ZNF235Q14590 738 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 RFTN1Q14699 578 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SLC14A2Q15849 920 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 CNGA3Q16281 694 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 PPM1LQ5SGD2 360 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 GKAP1Q5VSY0 366 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 HHATQ5VTY9 493 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 RNF219Q5W0B1 726 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 PDPK2PQ6A1A2 396 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 FAM109BQ6ICB4 259 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 STRA8Q7Z7C7 330 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 CNPY4Q8N129 248 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 ELMOD1Q8N336 334 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 CPXM2Q8N436 756 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 HJURPQ8NCD3 748 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 PPHLN1Q8NEY8 458 aaKnown RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SHKBP1Q8TBC3 707 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 ACMSDQ8TDX5 336 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 TCEAL4Q96EI5 215 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 TMA16Q96EY4 203 aaKnown RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 FAM111AQ96PZ2 611 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 FEM1AQ9BSK4 669 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 ASAH2Q9NR71 780 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 CFAP97Q9P2B7 532 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 DNMT3BQ9UBC3 853 aaKnown RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 UBA2Q9UBT2 640 aaPredicted RBP10.97□□□□□ -0.65
PFDN5-216ENST00000552341 SEPT3Q9UH03 358 aa10.97□□□□□ -0.65
PFDN5-216ENST00000552341 REV3LO60673 3130 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 TRAV19A0A0A6YYK7 116 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 MROH6A6NGR9 719 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 GRXCR1A8MXD5 290 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 TPP1O14773 563 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 MYL4P12829 197 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 GABRB3P28472 473 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 PDE1CQ14123 709 aaPredicted RBP10.96□□□□□ -0.65
PFDN5-216ENST00000552341 FSTL4Q6MZW2 842 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 MICALCLQ6ZW33 695 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 BBS7Q8IWZ6 715 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 NDUFAF2Q8N183 169 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 RIN3Q8TB24 985 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 ZNF75CPQ92670 426 aaPredicted RBP10.96□□□□□ -0.65
PFDN5-216ENST00000552341 PTPRN2Q92932 1015 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 FEM1CQ96JP0 617 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 ELAC2Q9BQ52 826 aaKnown RBP10.96□□□□□ -0.65
PFDN5-216ENST00000552341 CXorf56Q9H5V9 222 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 NOD2Q9HC29 1040 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 MAN1C1Q9NR34 630 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 IARS2Q9NSE4 1012 aaKnown RBP10.96□□□□□ -0.65
PFDN5-216ENST00000552341 PCMTD2Q9NV79 361 aa10.96□□□□□ -0.65
PFDN5-216ENST00000552341 CBX4O00257 560 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 SNAP91O60641 907 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 VAPBO95292 243 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 GSRP00390 522 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 EPCAMP16422 314 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 SPRP35270 261 aaPredicted RBP10.96□□□□□ -0.66
PFDN5-216ENST00000552341 CSE1LP55060 971 aaKnown RBP10.96□□□□□ -0.66
PFDN5-216ENST00000552341 CDK18Q07002 472 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 ZKSCAN8Q15776 578 aaPredicted RBP10.96□□□□□ -0.66
PFDN5-216ENST00000552341 KIAA0930Q6ICG6 404 aaPredicted RBP10.96□□□□□ -0.66
PFDN5-216ENST00000552341 CARNMT1Q8N4J0 409 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 DCLK2Q8N568 766 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 ACVR1CQ8NER5 493 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 OR13J1Q8NGT2 312 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 PRKD2Q9BZL6 878 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 SLC13A1Q9BZW2 595 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 MUC3BQ9H195 1237 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 SLCO1B3Q9NPD5 702 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 ARHGAP26Q9UNA1 814 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms