RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 VPS45Q9NRW7 570 aa7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 OLA1Q9NTK5 396 aaKnown RBP7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 TRPM5Q9NZQ8 1165 aa7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 XPO7Q9UIA9 1087 aaKnown RBP7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 ADAM21Q9UKJ8 722 aa7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 NUDT5Q9UKK9 219 aa7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 NEU3Q9UQ49 428 aa7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 TLR6Q9Y2C9 796 aa7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 DOCK9Q9BZ29 2069 aa7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 LAMA5O15230 3695 aa7.54□□□□□ -1.2
SMARCD1-210ENST00000551352 BAHCC1Q9P281 2608 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ADAMTS20P59510 1910 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 C1QTNF9BB2RNN3 333 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 RNF103O00237 685 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 RASGRF2O14827 1237 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 FGF10O15520 208 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 OPHN1O60890 802 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TCEA3O75764 348 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 STK10O94804 968 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 METTL18O95568 372 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 KLF8O95600 359 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 IGLV3-27P01718 113 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 C1QTNF9P0C862 333 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 MBL2P11226 248 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TPSB2P20231 275 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 NR1D1P20393 614 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 MX2P20592 715 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TIE1P35590 1138 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 PTGER3P43115 390 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TBX4P57082 545 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 IRX4P78413 519 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 SKOR1P84550 965 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 PPIDQ08752 370 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 GALNT2Q10471 571 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 AP1B1Q10567 949 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 EFEMP1Q12805 493 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 CBLBQ13191 982 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 SEMA5AQ13591 1074 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TRIP4Q15650 581 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TPSAB1Q15661 275 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 MSS51Q4VC12 460 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ANKRD20A2Q5SQ80 823 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 C10orf120Q5SQS8 335 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 LY6G5CQ5SRR4 150 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 FAM182AQ5T1J6 154 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ARTNQ5T4W7 220 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 FAXCQ5TGI0 409 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ANKRD20A1Q5TYW2 823 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ANKRD20A3Q5VUR7 823 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 PEAR1Q5VY43 1037 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 IL31Q6EBC2 164 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 PSAPL1Q6NUJ1 521 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 KDM7AQ6ZMT4 941 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ARHGEF18Q6ZSZ5 1173 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 BBS7Q8IWZ6 715 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TP53INP2Q8IXH6 220 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 CCDC13Q8IYE1 715 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ZBED8Q8IZ13 594 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 PDIK1LQ8N165 341 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 NETO2Q8NC67 525 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 MCUQ8NE86 351 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TSTD1Q8NFU3 115 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 EPS8L3Q8TE67 593 aaKnown RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TLCD1Q96CP7 247 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 HDAC11Q96DB2 347 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 TBC1D31Q96DN5 1066 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ERLEC1Q96DZ1 483 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 PGM2Q96G03 612 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ACOX2Q99424 681 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 FERMT1Q9BQL6 677 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 FRMD8Q9BZ67 464 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ROPN1BQ9BZX4 212 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 BRD8Q9H0E9 1235 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 SIK2Q9H0K1 926 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ROPN1Q9HAT0 212 aaPredicted RBP7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 ETNK1Q9HBU6 452 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 PSD3Q9NYI0 1048 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 MARCH2Q9P0N8 246 aa7.53□□□□□ -1.2
SMARCD1-210ENST00000551352 A0A087WUV0 522 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 TLDC2A0PJX2 215 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 SMIM23A6NLE4 172 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 E9PAM4 449 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 RGS16O15492 202 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 MTSS1O43312 755 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 FOXD2O60548 495 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 TLR5O60602 858 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 TULP3O75386 442 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 BANF1O75531 89 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 KAT7O95251 611 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 TBX18O95935 607 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 MOCS2O96007 188 aaPredicted RBP7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 APOEP02649 317 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 IVLP07476 585 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 APRTP07741 180 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 ADH5P11766 374 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 TSHRP16473 764 aa7.52□□□□□ -1.21
SMARCD1-210ENST00000551352 PFKLP17858 780 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms