RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 SETD7Q8WTS6 366 aaKnown RBP19.26■□□□□ 0.67
DDX54-208ENST00000551344 KLHL32Q96NJ5 620 aa19.26■□□□□ 0.67
DDX54-208ENST00000551344 ELF4Q99607 663 aaPredicted RBP19.26■□□□□ 0.67
DDX54-208ENST00000551344 ERVMER34-1Q9H9K5 563 aa19.26■□□□□ 0.67
DDX54-208ENST00000551344 NHEJ1Q9H9Q4 299 aaPredicted RBP19.26■□□□□ 0.67
DDX54-208ENST00000551344 A0A1B0GTQ1 180 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 AKR1B15C9JRZ8 316 aaPredicted RBP19.25■□□□□ 0.67
DDX54-208ENST00000551344 DFFAO00273 331 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 FLRT2O43155 660 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 CBFA2T3O75081 653 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 PALMO75781 387 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 TMEM253P0C7T8 217 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 AMPD1P23109 780 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 CCT8P50990 548 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 NXPH1P58417 271 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 SIM1P81133 766 aaPredicted RBP19.25■□□□□ 0.67
DDX54-208ENST00000551344 SHC2P98077 582 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 IL10RBQ08334 325 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 TBX2Q13207 712 aaPredicted RBP19.25■□□□□ 0.67
DDX54-208ENST00000551344 RFTN1Q14699 578 aaPredicted RBP19.25■□□□□ 0.67
DDX54-208ENST00000551344 TMEM259Q4ZIN3 620 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 TXNRD3NBQ6F5E7 133 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 TTC7BQ86TV6 843 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 NPWQ8N729 165 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 TMEM145Q8NBT3 493 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 FAM174AQ8TBP5 190 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 CAMK1GQ96NX5 476 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 CSPG4P5Q96PW8 444 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 PACSIN1Q9BY11 444 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 SLC17A9Q9BYT1 436 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 PCDH18Q9HCL0 1135 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 RCOR3Q9P2K3 495 aaPredicted RBP19.25■□□□□ 0.67
DDX54-208ENST00000551344 DKK3Q9UBP4 350 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 LHX3Q9UBR4 397 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 PCOLCE2Q9UKZ9 415 aa19.25■□□□□ 0.67
DDX54-208ENST00000551344 ZFR2Q9UPR6 939 aaKnown RBP19.25■□□□□ 0.67
DDX54-208ENST00000551344 PLXNA2O75051 1894 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 YKT6O15498 198 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 PROSCO94903 275 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 HNRNPA2B1P22626 353 aaKnown RBP19.24■□□□□ 0.67
DDX54-208ENST00000551344 AKT2P31751 481 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 SSR1P43307 286 aaKnown RBP19.24■□□□□ 0.67
DDX54-208ENST00000551344 CSNK1DP48730 415 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 NSUN2Q08J23 767 aaKnown RBP eCLIP19.24■□□□□ 0.67
DDX54-208ENST00000551344 TMCO3Q6UWJ1 677 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 OXR1Q8N573 874 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 NETO2Q8NC67 525 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 FAM71BQ8TC56 605 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 RHBDD1Q8TEB9 315 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 TSC1Q92574 1164 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 KLK6Q92876 244 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 KLHDC7BQ96G42 594 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 SP110Q9HB58 689 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 IPO11Q9UI26 975 aaKnown RBP19.24■□□□□ 0.67
DDX54-208ENST00000551344 ANGPTL2Q9UKU9 493 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 HS3ST3A1Q9Y663 406 aa19.24■□□□□ 0.67
DDX54-208ENST00000551344 SPAARA0A1B0GVQ0 90 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 NEMP1O14524 444 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 PRLRP16471 622 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 IL4RP24394 825 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 RXRGP48443 463 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 ARRB1P49407 418 aaPredicted RBP19.23■□□□□ 0.67
DDX54-208ENST00000551344 SUOXP51687 545 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 CDH6P55285 790 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 FAM193AP78312 1265 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 KRT81Q14533 505 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 SEL1L3Q68CR1 1132 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 GLRX5Q86SX6 157 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 ASB12Q8WXK4 309 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 ZNF641Q96N77 438 aaPredicted RBP19.23■□□□□ 0.67
DDX54-208ENST00000551344 ZNF599Q96NL3 588 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 CDC6Q99741 560 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 SUV39H2Q9H5I1 410 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 DOCK9Q9BZ29 2069 aa19.23■□□□□ 0.67
DDX54-208ENST00000551344 TRPM6Q9BX84 2022 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 AREL1O15033 823 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 INSIG1O15503 277 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 TRIM16O95361 564 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 PAK4O96013 591 aaPredicted RBP19.22■□□□□ 0.67
DDX54-208ENST00000551344 TIMP2P16035 220 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 MAN1A1P33908 653 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 SERPINB6P35237 376 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 ABL2P42684 1182 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 GRK6P43250 576 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 RENBPP51606 427 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 SGCGQ13326 291 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 PRAMEF14Q5SWL7 426 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 TMCO4Q5TGY1 634 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 ARHGAP36Q6ZRI8 547 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 SPATS2Q86XZ4 545 aaKnown RBP19.22■□□□□ 0.67
DDX54-208ENST00000551344 LRRC49Q8IUZ0 686 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 TSEN2Q8NCE0 465 aaKnown RBP19.22■□□□□ 0.67
DDX54-208ENST00000551344 SLC35G2Q8TBE7 412 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 EXOC2Q96KP1 924 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 LENG8Q96PV6 779 aaPredicted RBP19.22■□□□□ 0.67
DDX54-208ENST00000551344 TUBGCP5Q96RT8 1024 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 CINPQ9BW66 212 aaPredicted RBP19.22■□□□□ 0.67
DDX54-208ENST00000551344 C1QTNF2Q9BXJ5 285 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 ETNK2Q9NVF9 386 aa19.22■□□□□ 0.67
DDX54-208ENST00000551344 KRT7P08729 469 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms