RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 F8W810 466 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 RHODO00212 210 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 RNMTO43148 476 aaKnown RBP5.2□□□□□ -1.58
LIMA1-205ENST00000550592 TGFB1I1O43294 461 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 KIF1CO43896 1103 aaKnown RBP5.2□□□□□ -1.58
LIMA1-205ENST00000550592 ZBED4O75132 1171 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 GALTP07902 379 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 MPGP29372 298 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 CIITAP33076 1130 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 SLC16A2P36021 539 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 RGS2P41220 211 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 ARSFP54793 590 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 EIF3BP55884 814 aaKnown RBP5.2□□□□□ -1.58
LIMA1-205ENST00000550592 ME3Q16798 604 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 SYTL3Q4VX76 610 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 SNX30Q5VWJ9 437 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 B4GALNT4Q76KP1 1039 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 DEFB132Q7Z7B7 95 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 TADA2BQ86TJ2 420 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 TRIM74Q86UV6 250 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 TRIM73Q86UV7 250 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 CCDC25Q86WR0 208 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 DDIASQ8IXT1 998 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 OR4N2Q8NGD1 307 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 ETNPPLQ8TBG4 499 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 CUL5Q93034 780 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 KLHL29Q96CT2 875 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 KLHL15Q96M94 604 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 RANBP17Q9H2T7 1088 aaKnown RBP5.2□□□□□ -1.58
LIMA1-205ENST00000550592 BRF2Q9HAW0 419 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 PCDHB16Q9NRJ7 776 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 TMEM45AQ9NWC5 275 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 BABAM1Q9NWV8 329 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 KIAA1456Q9P272 454 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 LAS1LQ9Y4W2 734 aaKnown RBP5.2□□□□□ -1.58
LIMA1-205ENST00000550592 PSAT1Q9Y617 370 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 PIAS3Q9Y6X2 628 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 IQGAP1P46940 1657 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 KDM5CP41229 1560 aa5.2□□□□□ -1.58
LIMA1-205ENST00000550592 TMEM94Q12767 1356 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 PRSS47A8MTI9 375 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 TAF4O00268 1085 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 TACC1O75410 805 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 TMCC1O94876 653 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 FMO4P31512 558 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 CPOXP36551 454 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 RPL7AP62424 266 aaKnown RBP5.19□□□□□ -1.58
LIMA1-205ENST00000550592 SETQ01105 290 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-205ENST00000550592 DCTN2Q13561 401 aaKnown RBP5.19□□□□□ -1.58
LIMA1-205ENST00000550592 EDRF1Q3B7T1 1238 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 ALG10Q5BKT4 473 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 ALG10BQ5I7T1 473 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 SPATA1Q5VX52 437 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 KIAA1614Q5VZ46 1190 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 MOB3CQ70IA8 216 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 KDELC2Q7Z4H8 507 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 FAM160B2Q86V87 743 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 ADSSL1Q8N142 457 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 GDPD5Q8WTR4 605 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 QTRT1Q9BXR0 403 aaKnown RBP5.19□□□□□ -1.58
LIMA1-205ENST00000550592 TMPRSS5Q9H3S3 457 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 KRT84Q9NSB2 600 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 SNTG1Q9NSN8 517 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 RNF146Q9NTX7 359 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 C20orf141Q9NUB4 165 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.19□□□□□ -1.58
LIMA1-205ENST00000550592 PCDHGB5Q9Y5G0 923 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 BLMP54132 1417 aaPredicted RBP5.19□□□□□ -1.58
LIMA1-205ENST00000550592 NWD1Q149M9 1564 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 ADGRF5Q8IZF2 1346 aa5.19□□□□□ -1.58
LIMA1-205ENST00000550592 CLTCQ00610 1675 aaKnown RBP5.18□□□□□ -1.58
LIMA1-205ENST00000550592 ANKRD18BA2A2Z9 1011 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 LDLRAD4O15165 306 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 SEC14L2O76054 403 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 SCGB1D1O95968 90 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 LDHCP07864 332 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 LAMP2P13473 410 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 YWHAQP27348 245 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 ICAM3P32942 547 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 BSGP35613 385 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 DPP6P42658 865 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 CENPAP49450 140 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 CLCNKBP51801 687 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 NAP1L1P55209 391 aaKnown RBP5.18□□□□□ -1.58
LIMA1-205ENST00000550592 RPS3AP61247 264 aaKnown RBP5.18□□□□□ -1.58
LIMA1-205ENST00000550592 YWHAZP63104 245 aaKnown RBP5.18□□□□□ -1.58
LIMA1-205ENST00000550592 SLC18A2Q05940 514 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 NEXNQ0ZGT2 675 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 EIF4A2Q14240 407 aaKnown RBP5.18□□□□□ -1.58
LIMA1-205ENST00000550592 ENTPD8Q5MY95 495 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 PIK3CD-AS1Q5SR53 167 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 SERTAD4-AS1Q5TG53 156 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 SLC18B1Q6NT16 456 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 PXKQ7Z7A4 578 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 ZDHHC23Q8IYP9 409 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 FAM185AQ8N0U4 392 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 SLC25A41Q8N5S1 370 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 CREB3L4Q8TEY5 395 aa5.18□□□□□ -1.58
LIMA1-205ENST00000550592 BARD1Q99728 777 aaKnown RBP5.18□□□□□ -1.58
LIMA1-205ENST00000550592 WDR83Q9BRX9 315 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms