RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 IFIT5Q13325 482 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SNAPC2Q13487 334 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 RAPGEF1Q13905 1077 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 HABP2Q14520 560 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 CCDC6Q16204 474 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PFKFB3Q16875 520 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SLC4A8Q2Y0W8 1093 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 TDRD12Q587J7 1177 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 HSP90AA5PQ58FG0 334 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PLAC9Q5JTB6 97 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 KIAA1755Q5JYT7 1200 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 FAM83BQ5T0W9 1011 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 RNF219Q5W0B1 726 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 KLC3Q6P597 504 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 H2AFVQ71UI9 128 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 NOP9Q86U38 636 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 VSIG1Q86XK7 387 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PDSS2Q86YH6 399 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 CROCCP3Q8IVE0 287 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 KIRREL3Q8IZU9 778 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SPICE1Q8N0Z3 855 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 BBOF1Q8ND07 529 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 NSUN6Q8TEA1 469 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 RSPH1Q8WYR4 309 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 TBC1D5Q92609 795 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SLCO2A1Q92959 643 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 CALML4Q96GE6 196 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 HES6Q96HZ4 224 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 HIC2Q96JB3 615 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF333Q96JL9 665 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 RMDN2Q96LZ7 410 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 CATSPER2Q96P56 530 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 CAMKK2Q96RR4 588 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 NDNQ99608 321 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF184Q99676 751 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 VRK1Q99986 396 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SYT15Q9BQS2 421 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 LZTS2Q9BRK4 669 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 FAM167BQ9BTA0 163 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 MXD3Q9BW11 206 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 BRIP1Q9BX63 1249 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SPATA16Q9BXB7 569 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 RAB34Q9BZG1 259 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 TRIM9Q9C026 710 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 DPH5Q9H2P9 285 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 SYNCQ9H7C4 482 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 FAM207AQ9NSI2 230 aaPredicted RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ZDHHC18Q9NUE0 388 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ABCF3Q9NUQ8 709 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 TYW1Q9NV66 732 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ELOVL5Q9NYP7 299 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 DLGAP2Q9P1A6 1054 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 THEGQ9P2T0 379 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 STX18Q9P2W9 335 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 LGALS13Q9UHV8 139 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ANGPTL2Q9UKU9 493 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 AMFRQ9UKV5 643 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 MTUS1Q9ULD2 1270 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PAIP2BQ9ULR5 123 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 TFR2Q9UP52 801 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 STXBP5LQ9Y2K9 1186 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ATP8A1Q9Y2Q0 1164 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PCDHGA9Q9Y5G4 932 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PCDHGA8Q9Y5G5 932 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PCDHGA7Q9Y5G6 932 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PCDHGA6Q9Y5G7 932 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PCDHGA3Q9Y5H0 932 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 COL4A3BPQ9Y5P4 624 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PARP4Q9UKK3 1724 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PHRF1Q9P1Y6 1649 aaKnown RBP3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PFASO15067 1338 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PASKQ96RG2 1323 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 PCDH11YQ9BZA8 1340 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ZNF532Q9HCE3 1301 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 ADAMTS7Q9UKP4 1686 aa3.43□□□□□ -1.86
CCNT1-203ENST00000550457 DIP2BQ9P265 1576 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 TIAM2Q8IVF5 1701 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 MYO5AQ9Y4I1 1855 aaKnown RBP3.42□□□□□ -1.86
CCNT1-203ENST00000550457 CCDC194A0A1B0GVG4 234 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 TMEM120BA0PK00 339 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 CCDC162PA2VCL2 907 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 GTPBP10A4D1E9 387 aaKnown RBP3.42□□□□□ -1.86
CCNT1-203ENST00000550457 TRIM49BA6NDI0 452 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 SIGLEC16A6NMB1 481 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 ADAMTS3O15072 1205 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 WDR46O15213 610 aaKnown RBP3.42□□□□□ -1.86
CCNT1-203ENST00000550457 PPM1DO15297 605 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 RIPK2O43353 540 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 BUB1O43683 1085 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 CCDC22O60826 627 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 PFDN1O60925 122 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 CDH16O75309 829 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 VPS4BO75351 444 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 CSDE1O75534 798 aaKnown RBP3.42□□□□□ -1.86
CCNT1-203ENST00000550457 A1BGP04217 495 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 PCCAP05165 728 aaPredicted RBP3.42□□□□□ -1.86
CCNT1-203ENST00000550457 PYGLP06737 847 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 ABHD2P08910 425 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 FAM163BP0C2L3 166 aa3.42□□□□□ -1.86
CCNT1-203ENST00000550457 PABPC4LP0CB38 370 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms