RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 KYAT3Q6YP21 454 aaKnown RBP21.18■□□□□ 0.98
PRDM4-205ENST00000550376 PTAR1Q7Z6K3 402 aaPredicted RBP21.18■□□□□ 0.98
PRDM4-205ENST00000550376 CEP97Q8IW35 865 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 PDZD8Q8NEN9 1154 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 NDNQ99608 321 aa21.18■□□□□ 0.98
PRDM4-205ENST00000550376 MRPL17Q9NRX2 175 aaKnown RBP21.18■□□□□ 0.98
PRDM4-205ENST00000550376 A0A0U1RQS6 177 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 SERPINB3P29508 390 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 GJA8P48165 433 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 SMAD3P84022 425 aaKnown RBP21.17■□□□□ 0.98
PRDM4-205ENST00000550376 MSLNQ13421 630 aaPredicted RBP21.17■□□□□ 0.98
PRDM4-205ENST00000550376 RAB33AQ14088 237 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 PTPRRQ15256 657 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 SNX30Q5VWJ9 437 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 TPGS2Q68CL5 300 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 TTC7BQ86TV6 843 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 BLOC1S5Q8TDH9 187 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 MYRFLQ96LU7 910 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 INSL5Q9Y5Q6 135 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 FGF3P11487 239 aaPredicted RBP21.17■□□□□ 0.98
PRDM4-205ENST00000550376 MAPKAPK2P49137 400 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 SCNN1BP51168 640 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 CYP4F8P98187 520 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 OCRLQ01968 901 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 THOC5Q13769 683 aaKnown RBP21.17■□□□□ 0.98
PRDM4-205ENST00000550376 VEPH1Q14D04 833 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 MBLAC2Q68D91 279 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 CNSTQ6PJW8 725 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 HS6ST3Q8IZP7 471 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 GPATCH11Q8N954 259 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 PLCD4Q9BRC7 762 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 KLF16Q9BXK1 252 aaPredicted RBP21.17■□□□□ 0.98
PRDM4-205ENST00000550376 PDFQ9HBH1 243 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 NOD2Q9HC29 1040 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 DONSONQ9NYP3 566 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 ARL5AQ9Y689 179 aa21.17■□□□□ 0.98
PRDM4-205ENST00000550376 PRRC2BQ5JSZ5 2229 aaKnown RBP21.17■□□□□ 0.98
PRDM4-205ENST00000550376 AP3B1O00203 1094 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 CNPP09543 421 aaKnown RBP21.16■□□□□ 0.98
PRDM4-205ENST00000550376 YBEYP58557 167 aaPredicted RBP21.16■□□□□ 0.98
PRDM4-205ENST00000550376 ITGA9Q13797 1035 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 DDX53Q86TM3 631 aaKnown RBP21.16■□□□□ 0.98
PRDM4-205ENST00000550376 ALYREFQ86V81 257 aaKnown RBP21.16■□□□□ 0.98
PRDM4-205ENST00000550376 OR6P1Q8NGX9 317 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 ATP13A1Q9HD20 1204 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 SNAP91O60641 907 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 ATXN1LP0C7T5 689 aaKnown RBP21.16■□□□□ 0.98
PRDM4-205ENST00000550376 ADGRF1Q5T601 910 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 TMCO4Q5TGY1 634 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 ATG16L1Q676U5 607 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 NEPROQ6NW34 567 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 OR13J1Q8NGT2 312 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 CDK5RAP1Q96SZ6 601 aaKnown RBP21.16■□□□□ 0.98
PRDM4-205ENST00000550376 POLR1EQ9GZS1 481 aaKnown RBP21.16■□□□□ 0.98
PRDM4-205ENST00000550376 COPG2Q9UBF2 871 aa21.16■□□□□ 0.98
PRDM4-205ENST00000550376 MTF2Q9Y483 593 aaPredicted RBP21.16■□□□□ 0.98
PRDM4-205ENST00000550376 DOCK6Q96HP0 2047 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 KLF11O14901 512 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 TIMM44O43615 452 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 FGF18O76093 207 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 SLC4A1P02730 911 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 STXBP5Q5T5C0 1151 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 RNF219Q5W0B1 726 aaPredicted RBP21.15■□□□□ 0.98
PRDM4-205ENST00000550376 KCTD4Q8WVF5 259 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 HERC2P3Q9BVR0 1158 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 TMEM51Q9NW97 253 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 CXXC1Q9P0U4 656 aaPredicted RBP21.15■□□□□ 0.98
PRDM4-205ENST00000550376 ARMCX1Q9P291 453 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.15■□□□□ 0.98
PRDM4-205ENST00000550376 TGM5O43548 720 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 RHOCP08134 193 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 T-ENOLP0DO92 83 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 LAG3P18627 525 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 MAGEA12P43365 314 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 EPHB3P54753 998 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 CDH4P55283 916 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 ZNF177Q13360 481 aaPredicted RBP21.15■□□□□ 0.98
PRDM4-205ENST00000550376 FRG1Q14331 258 aaKnown RBP21.15■□□□□ 0.98
PRDM4-205ENST00000550376 RBM20Q5T481 1227 aaKnown RBP21.15■□□□□ 0.98
PRDM4-205ENST00000550376 CARNMT1Q8N4J0 409 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 HDAC10Q969S8 669 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 KLHL29Q96CT2 875 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 IFT43Q96FT9 208 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 ZFRQ96KR1 1074 aaKnown RBP21.15■□□□□ 0.98
PRDM4-205ENST00000550376 MUC3BQ9H195 1237 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 RHOJQ9H4E5 214 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 PLK2Q9NYY3 685 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 ZFP69BQ9UJL9 534 aa21.15■□□□□ 0.98
PRDM4-205ENST00000550376 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.14■□□□□ 0.98
PRDM4-205ENST00000550376 TK2O00142 265 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 DNAJC8O75937 253 aaPredicted RBP21.14■□□□□ 0.98
PRDM4-205ENST00000550376 CPA3P15088 417 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 AQP5P55064 265 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 OXCT1P55809 520 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 RABGAP1LQ5R372 815 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 NAPRTQ6XQN6 538 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 MAB21L3Q8N8X9 362 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 AGR3Q8TD06 166 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 GPR22Q99680 433 aa21.14■□□□□ 0.98
PRDM4-205ENST00000550376 SMG9Q9H0W8 520 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms