RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 CDK5RAP1Q96SZ6 601 aaKnown RBP17.05■□□□□ 0.32
ATXN2-219ENST00000550104 PAAF1Q9BRP4 392 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 PSAT1Q9Y617 370 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 TMEM114B3SHH9 223 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 IRAK2O43187 625 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 NFKBIAP25963 317 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 LBRQ14739 615 aaKnown RBP17.05■□□□□ 0.32
ATXN2-219ENST00000550104 ANGPTL8Q6UXH0 198 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 FBXO39Q8N4B4 442 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 GSTCDQ8NEC7 633 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 CATSPERZQ9NTU4 200 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 GID8Q9NWU2 228 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 DNMT3LQ9UJW3 386 aa17.05■□□□□ 0.32
ATXN2-219ENST00000550104 MATN3O15232 486 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 E2F6O75461 281 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 SEC24DO94855 1032 aaPredicted RBP17.04■□□□□ 0.32
ATXN2-219ENST00000550104 TBX18O95935 607 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 LRG1P02750 347 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 CLCN5P51795 746 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 FOXD4Q12950 439 aaPredicted RBP17.04■□□□□ 0.32
ATXN2-219ENST00000550104 AARS2Q5JTZ9 985 aaKnown RBP17.04■□□□□ 0.32
ATXN2-219ENST00000550104 PCDH20Q8N6Y1 951 aaKnown RBP17.04■□□□□ 0.32
ATXN2-219ENST00000550104 OLIG1Q8TAK6 271 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 MRPL57Q9BQC6 102 aaKnown RBP17.04■□□□□ 0.32
ATXN2-219ENST00000550104 FTHL17Q9BXU8 183 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 CLPBQ9H078 707 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 RIC8BQ9NVN3 520 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 ATP6AP2A0A1C7CYW4 349 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 ATP6AP2O75787 350 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 LRPAP1P30533 357 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 PSEN1P49768 467 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 VARS2Q5ST30 1063 aaKnown RBP17.04■□□□□ 0.32
ATXN2-219ENST00000550104 CDHR3Q6ZTQ4 885 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 TAS2R1Q9NYW7 299 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 LRCH1Q9Y2L9 728 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 Q9Y3F1 56 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 CDK18Q07002 472 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 HECTD3Q5T447 861 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 TP53INP2Q8IXH6 220 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 BTN2A3PQ96KV6 586 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 ATP11BQ9Y2G3 1177 aa17.04■□□□□ 0.32
ATXN2-219ENST00000550104 A0A0U1RQF3 1178 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 MAGEA13PA6NCF6 341 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 SIN3BO75182 1162 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 HIST1H2AGP0C0S8 130 aaPredicted RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 HIST1H2ADP20671 130 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 EPHB3P54753 998 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 RFWD3Q6PCD5 774 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 GPRIN1Q7Z2K8 1008 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 PIWIL4Q7Z3Z4 852 aaKnown RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 CASP10Q92851 521 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 HIST1H2AHQ96KK5 128 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 HIST1H2AJQ99878 128 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 H2AFJQ9BTM1 129 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 KLHL4Q9C0H6 718 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 PNPLA8Q9NP80 782 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 ZNF212Q9UDV6 495 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 SNX13Q9Y5W8 968 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 SYCE1LA8MT33 242 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 A8MX80 341 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 BTN3A1O00481 513 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 ZNF865P0CJ78 1059 aaPredicted RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 OR1D2P34982 312 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 NEK3P51956 506 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 IRF9Q00978 393 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 ZBTB17Q13105 803 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 TRNP1Q6NT89 227 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 NET1Q7Z628 596 aaPredicted RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 ZNF781Q8N8C0 355 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 DENND1AQ8TEH3 1009 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 HMCESQ96FZ2 354 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 GATA5Q9BWX5 397 aaPredicted RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 WWOXQ9NZC7 414 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 THEGQ9P2T0 379 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 hCG_2014768A0A024R1R8 64 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 MYADML2A6NDP7 307 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 KCNU1A8MYU2 1149 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 PTGESO14684 152 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 KRT72Q14CN4 511 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 PAFAH1B3Q15102 231 aaKnown RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 ARL13AQ5H913 290 aaPredicted RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 TMCO4Q5TGY1 634 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 GDPD5Q8WTR4 605 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.03■□□□□ 0.324e-13■■■■□ 22
ATXN2-219ENST00000550104 STN1Q9H668 368 aaKnown RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 VWA7Q9Y334 891 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 ITM2AO43736 263 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 CDH13P55290 713 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 MRPS22P82650 360 aaKnown RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 PEX6Q13608 980 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 CAPRIN1Q14444 709 aaKnown RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 TMEM259Q4ZIN3 620 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 UGT3A1Q6NUS8 523 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 ANKS3Q6ZW76 656 aa17.03■□□□□ 0.32
ATXN2-219ENST00000550104 PTGR2Q8N8N7 351 aaPredicted RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 RTL3Q8N8U3 475 aaKnown RBP17.03■□□□□ 0.32
ATXN2-219ENST00000550104 CNBD2Q96M20 576 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms