RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 MFN1Q8IWA4 741 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 ZNF683Q8IZ20 524 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 RBM15BQ8NDT2 890 aaKnown RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 FEM1CQ96JP0 617 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 FAM161BQ96MY7 647 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 RPRD1AQ96P16 312 aaPredicted RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 ASB2Q96Q27 587 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 TRMOQ9BU70 441 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 C20orf27Q9GZN8 174 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 NACA2Q9H009 215 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 MAGEH1Q9H213 219 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 COG4Q9H9E3 785 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 POPDC3Q9HBV1 291 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 ATP13A1Q9HD20 1204 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 MRPL40Q9NQ50 206 aaKnown RBP9.04□□□□□ -0.96
TMEM116-209ENST00000550020 TCF7L2Q9NQB0 619 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 PNPOQ9NVS9 261 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 RNF186Q9NXI6 227 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 MPP6Q9NZW5 540 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 HSFX1Q9UBD0 423 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 CDYLQ9Y232 598 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 LRRC42Q9Y546 428 aa9.04□□□□□ -0.96
TMEM116-209ENST00000550020 PATJQ8NI35 1801 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 CCDC189A1A4V9 331 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 C2orf71A6NGG8 1288 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 PITPNM1O00562 1244 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ENPP3O14638 875 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 NVLO15381 856 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 MAP3K7O43318 606 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ENTPD5O75356 428 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 CRTAMO95727 393 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 MT-CYBP00156 380 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 LTA4HP09960 611 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 SLC35E2BP0CK96 405 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ACADSP16219 412 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 SAT1P21673 171 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 OR1E1P30953 314 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ATP5C1P36542 298 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 CD86P42081 329 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 SLC1A2P43004 574 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 GRIA4P48058 902 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 LEPRP48357 1165 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 PPP3CCP48454 512 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 CLNS1AP54105 237 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ACTR3P61158 418 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 IRX1P78414 480 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 SATB1Q01826 763 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 TAF10Q12962 218 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 TUBB3Q13509 450 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 OLIG2Q13516 323 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 SERINC3Q13530 473 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 LBRQ14739 615 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 KPNB1Q14974 876 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 HERC3Q15034 1050 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ACAP2Q15057 778 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 RCN1Q15293 331 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 MAPRE2Q15555 327 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 CNGA3Q16281 694 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 PSMD5Q16401 504 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 PCSK7Q16549 785 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 FAM45BPQ6NSW5 357 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ESRP1Q6NXG1 681 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 FUT10Q6P4F1 479 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 TLDC1Q6P9B6 456 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 KLHDC10Q6PID8 442 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 TRAF7Q6Q0C0 670 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ARHGAP36Q6ZRI8 547 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 TMC7Q7Z402 723 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 RAB44Q7Z6P3 723 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 C14orf80Q86SX3 495 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 TTC7BQ86TV6 843 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 TREML1Q86YW5 311 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 NPAS4Q8IUM7 802 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 SLC41A1Q8IVJ1 513 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ULK2Q8IYT8 1036 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 TNS4Q8IZW8 715 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 LRRC43Q8N309 656 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 MAB21L3Q8N8X9 362 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 GPATCH11Q8N954 259 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 RP9Q8TA86 221 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 FAM45AQ8TCE6 357 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 KCTD4Q8WVF5 259 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 DNAJC9Q8WXX5 260 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 N4BP2L2Q92802 583 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 AZIN2Q96A70 460 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 PLD4Q96BZ4 506 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 PABPC5Q96DU9 382 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 HMCESQ96FZ2 354 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 MYCBPQ99417 103 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 SEPT5Q99719 369 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 EBF4Q9BQW3 602 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 RTKNQ9BST9 563 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 THTPAQ9BU02 230 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 GATA5Q9BWX5 397 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 C1QTNF1Q9BXJ1 281 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 MFSD1Q9H3U5 465 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ZNF395Q9H8N7 513 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 CAB39LQ9H9S4 337 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 NT5MQ9NPB1 228 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms