RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 HSPA12BQ96MM6 686 aa15.16■□□□□ 0.02
GPN3-206ENST00000549963 ZNF641Q96N77 438 aaPredicted RBP15.16■□□□□ 0.02
GPN3-206ENST00000549963 ATP13A3Q9H7F0 1226 aa15.16■□□□□ 0.02
GPN3-206ENST00000549963 CD93Q9NPY3 652 aa15.16■□□□□ 0.02
GPN3-206ENST00000549963 LHX3Q9UBR4 397 aa15.16■□□□□ 0.02
GPN3-206ENST00000549963 SUSD2Q9UGT4 822 aa15.16■□□□□ 0.02
GPN3-206ENST00000549963 hCG_1818297A0A087WSY0 165 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 BCLAF3A2AJT9 711 aaKnown RBP15.15■□□□□ 0.02
GPN3-206ENST00000549963 GOLGA6L9A6NEM1 432 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 TJP3O95049 919 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 FSBPO95073 299 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 FTCDO95954 541 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 UGT2B4P06133 528 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 CCNB1P14635 433 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 SERPINA4P29622 427 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 HOXD12P35452 270 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 DRD3P35462 400 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 MARCKSL1P49006 195 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 NEK3P51956 506 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 AP1S1P61966 158 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 POLR2LP62875 67 aaKnown RBP15.15■□□□□ 0.02
GPN3-206ENST00000549963 BCL2L1Q07817 233 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 CCDC173Q0VFZ6 552 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 AP1B1Q10567 949 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 SLC10A2Q12908 348 aaPredicted RBP15.15■□□□□ 0.02
GPN3-206ENST00000549963 DCAF12L1Q5VU92 463 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 NEK5Q6P3R8 708 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 ARMCX6Q7L4S7 300 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 TTC7BQ86TV6 843 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 ALYREFQ86V81 257 aaKnown RBP15.15■□□□□ 0.02
GPN3-206ENST00000549963 RAB7BQ96AH8 199 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 EXOC2Q96KP1 924 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 KLHL32Q96NJ5 620 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 HEMGNQ9BXL5 484 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 OSBPL8Q9BZF1 889 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 SUV39H2Q9H5I1 410 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 SCUBE2Q9NQ36 999 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 VPS45Q9NRW7 570 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 CAPN6Q9Y6Q1 641 aa15.15■□□□□ 0.02
GPN3-206ENST00000549963 A0A1W2PQ67 120 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 C16orf96A6NNT2 1141 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 NEMP1O14524 444 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 MTSS1O43312 755 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 PLRG1O43660 514 aaKnown RBP15.14■□□□□ 0.01
GPN3-206ENST00000549963 MAP3K6O95382 1288 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 NFKBIAP25963 317 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 MSNP26038 577 aaKnown RBP15.14■□□□□ 0.01
GPN3-206ENST00000549963 PTPN7P35236 360 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 NUDT1P36639 197 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 MPLP40238 635 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 PTGER3P43115 390 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 SUOXP51687 545 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 ADPRHP54922 357 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 PPIDQ08752 370 aaKnown RBP15.14■□□□□ 0.01
GPN3-206ENST00000549963 LLGL1Q15334 1064 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 RPS6KA1Q15418 735 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 KIAA0895LQ68EN5 471 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 NCEH1Q6PIU2 408 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 BBS12Q6ZW61 710 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 PRPF39Q86UA1 669 aaKnown RBP15.14■□□□□ 0.01
GPN3-206ENST00000549963 TFB1MQ8WVM0 346 aaKnown RBP15.14■□□□□ 0.01
GPN3-206ENST00000549963 SNX19Q92543 992 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 ARRDC3Q96B67 414 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 HES6Q96HZ4 224 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 FEM1CQ96JP0 617 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 POLR1EQ9GZS1 481 aaKnown RBP15.14■□□□□ 0.01
GPN3-206ENST00000549963 C6orf106Q9H6K1 298 aaPredicted RBP15.14■□□□□ 0.01
GPN3-206ENST00000549963 PREBQ9HCU5 417 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 NT5MQ9NPB1 228 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 RBM22Q9NW64 420 aaKnown RBP eCLIP15.14■□□□□ 0.01
GPN3-206ENST00000549963 DKK3Q9UBP4 350 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 SERGEFQ9UGK8 458 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 GON4LQ3T8J9 2241 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 NUMA1Q14980 2115 aa15.14■□□□□ 0.01
GPN3-206ENST00000549963 ZFHX2Q9C0A1 2572 aaPredicted RBP15.14■□□□□ 0.01
GPN3-206ENST00000549963 HACD1B0YJ81 288 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 PRR5-ARHGAP8B1AHC4 643 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 APOC4-APOC2K7ER74 178 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 PLK4O00444 970 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 ZNF189O75820 626 aaPredicted RBP15.13■□□□□ 0.01
GPN3-206ENST00000549963 PCDH8O95206 1070 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 PEX11BO96011 259 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 APOC2P02655 101 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 PYGMP11217 842 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 ADRB3P13945 408 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 ITPKAP23677 461 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 GKP32189 559 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 CCR5P51681 352 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 SPEM2Q0P670 501 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 DUOXA1Q1HG43 343 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 AGBL4Q5VU57 503 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 BRAT1Q6PJG6 821 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 NPNTQ6UXI9 565 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 ZSCAN30Q86W11 494 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 SLC41A1Q8IVJ1 513 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 TEX26Q8N6G2 289 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 C12orf50Q8NA57 414 aaPredicted RBP15.13■□□□□ 0.01
GPN3-206ENST00000549963 TTC13Q8NBP0 860 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 MAML1Q92585 1016 aa15.13■□□□□ 0.01
GPN3-206ENST00000549963 FAM131CQ96AQ9 280 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms