RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 DCAF15Q66K64 600 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 FAM45BPQ6NSW5 357 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 FAM45AQ8TCE6 357 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 LPIN3Q9BQK8 851 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 MRPL46Q9H2W6 279 aaKnown RBP23.36■■□□□ 1.33
NPAS3-206ENST00000548645 SMOXQ9NWM0 555 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 ZBTB24O43167 697 aaPredicted RBP23.36■■□□□ 1.33
NPAS3-206ENST00000548645 RPL34P49207 117 aaKnown RBP23.36■■□□□ 1.33
NPAS3-206ENST00000548645 TMEM62Q0P6H9 643 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 TSTD2Q5T7W7 516 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 INTS11Q5TA45 600 aaKnown RBP23.36■■□□□ 1.33
NPAS3-206ENST00000548645 NBPF12Q5TAG4 269 aaPredicted RBP23.36■■□□□ 1.33
NPAS3-206ENST00000548645 LYSMD3Q7Z3D4 306 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 CANT1Q8WVQ1 401 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 NXNL1Q96CM4 212 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 OMDQ99983 421 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 APOL2Q9BQE5 337 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 TMPRSS4Q9NRS4 437 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 WDR37Q9Y2I8 494 aa23.36■■□□□ 1.33
NPAS3-206ENST00000548645 DOCK1Q14185 1865 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 GPC4O75487 556 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 TPH1P17752 444 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 RAB10P61026 200 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 PFKPQ01813 784 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 HACD2Q6Y1H2 254 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 DDHD1Q8NEL9 900 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 FAM149B1Q96BN6 582 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 MLPHQ9BV36 600 aaPredicted RBP23.35■■□□□ 1.33
NPAS3-206ENST00000548645 GBA3Q9H227 469 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 FIS1Q9Y3D6 152 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 CROCCQ5TZA2 2017 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 SOWAHBA6NEL2 793 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 TRIM64A6NGJ6 449 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 SAC3D1A6NKF1 404 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 DCLK1O15075 740 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 ATE1O95260 518 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 ARF4P18085 180 aaPredicted RBP23.35■■□□□ 1.33
NPAS3-206ENST00000548645 POLD2P49005 469 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 GPR78Q96P69 363 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 ADI1Q9BV57 179 aa23.35■■□□□ 1.33
NPAS3-206ENST00000548645 NPLQ9BXD5 320 aaPredicted RBP23.35■■□□□ 1.33
NPAS3-206ENST00000548645 HBP1O60381 514 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 NRP2O60462 931 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 GNAO1P09471 354 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 HDCP19113 662 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 GRIA3P42263 894 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 DNAJB13P59910 316 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 POU5F1BQ06416 359 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 CNSTQ6PJW8 725 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 CBR4Q8N4T8 237 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 HSFY1Q96LI6 401 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 DOK1Q99704 481 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 DPEP3Q9H4B8 488 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 RPF2Q9H7B2 306 aaKnown RBP23.34■■□□□ 1.33
NPAS3-206ENST00000548645 SYNJ2BP-COX16A0A087WUM0 186 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 A0A087WZ62 844 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 AHSGP02765 367 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 STMN1P16949 149 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 C21orf59P57076 290 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 PSMD5Q16401 504 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 DCAF6Q58WW2 860 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 LAYNQ6UX15 382 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 ANKRD23Q86SG2 305 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 MRPL57Q9BQC6 102 aaKnown RBP23.34■■□□□ 1.33
NPAS3-206ENST00000548645 FDXACB1Q9BRP7 624 aaPredicted RBP23.34■■□□□ 1.33
NPAS3-206ENST00000548645 POMKQ9H5K3 350 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 MEAF6Q9HAF1 191 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 COX16Q9P0S2 106 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 RAD54BQ9Y620 910 aa23.34■■□□□ 1.33
NPAS3-206ENST00000548645 H3BMQ9 156 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 AP3B1O00203 1094 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 TFPTP0C1Z6 253 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 HNRNPLP14866 589 aaKnown RBP eCLIP23.33■■□□□ 1.33
NPAS3-206ENST00000548645 SLC26A2P50443 739 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 MERTKQ12866 999 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 FASTKD5Q7L8L6 764 aaKnown RBP23.33■■□□□ 1.33
NPAS3-206ENST00000548645 ERO1BQ86YB8 467 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 TXNDC5Q8NBS9 432 aaKnown RBP23.33■■□□□ 1.33
NPAS3-206ENST00000548645 SGF29Q96ES7 293 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 COG8Q96MW5 612 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 PFDN4Q9NQP4 134 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 CCM2LQ9NUG4 571 aaPredicted RBP23.33■■□□□ 1.33
NPAS3-206ENST00000548645 TRHDEQ9UKU6 1024 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 NCAM2O15394 837 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 ARIH2O95376 493 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 ATP5F1P24539 256 aaPredicted RBP23.33■■□□□ 1.33
NPAS3-206ENST00000548645 DCKP27707 260 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 LRPAP1P30533 357 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 KPNA2P52292 529 aaKnown RBP23.33■■□□□ 1.33
NPAS3-206ENST00000548645 SLC7A2P52569 658 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 RELAQ04206 551 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 CDH17Q12864 832 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 PLEKHA8Q96JA3 519 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 SLC38A7Q9NVC3 462 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 COQ6Q9Y2Z9 468 aa23.33■■□□□ 1.33
NPAS3-206ENST00000548645 MTSS1O43312 755 aa23.32■■□□□ 1.32
NPAS3-206ENST00000548645 PGK1P00558 417 aa23.32■■□□□ 1.32
NPAS3-206ENST00000548645 GABRB3P28472 473 aa23.32■■□□□ 1.32
NPAS3-206ENST00000548645 CD68P34810 354 aaPredicted RBP23.32■■□□□ 1.32
NPAS3-206ENST00000548645 TGFBIQ15582 683 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms