RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 ANKRD6Q9Y2G4 727 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 BTAF1O14981 1849 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 GLI3P10071 1580 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 RGSL1A5PLK6 1076 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 STBD1O95210 358 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 TKTP29401 623 aaKnown RBP15.83■□□□□ 0.12
CUX1-211ENST00000546411 ATP5C1P36542 298 aaKnown RBP15.83■□□□□ 0.12
CUX1-211ENST00000546411 PPP3CCP48454 512 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 CCDC15Q0P6D6 951 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 DCLRE1AQ6PJP8 1040 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 AMIGO2Q86SJ2 522 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 DNAJB14Q8TBM8 379 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 PPP1R10Q96QC0 940 aaKnown RBP15.83■□□□□ 0.12
CUX1-211ENST00000546411 NKX1-2Q9UD57 310 aaPredicted RBP15.83■□□□□ 0.12
CUX1-211ENST00000546411 ZNF180Q9UJW8 692 aa15.83■□□□□ 0.12
CUX1-211ENST00000546411 H7C4K7 107 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 SERPIND1P05546 499 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 SYTL3Q4VX76 610 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 TMEM198Q66K66 360 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 TP53INP2Q8IXH6 220 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 TBATAQ96M53 351 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 RBBP8Q99708 897 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 C16orf70Q9BSU1 422 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 ASPSCR1Q9BZE9 553 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 MMADHCQ9H3L0 296 aaPredicted RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 AGO3Q9H9G7 860 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 CATSPERZQ9NTU4 200 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 ADAM28Q9UKQ2 775 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 PCDHGB4Q9UN71 923 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 NDUFAF1Q9Y375 327 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 LRP5O75197 1615 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 SDK1Q7Z5N4 2213 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 CABYRO75952 493 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 ALDH1A1P00352 501 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 SLC2A4P14672 509 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 ATP6V1C1P21283 382 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 LIMK2P53671 638 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 LRRC74AQ0VAA2 488 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 PIWIL4Q7Z3Z4 852 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 MRPS31Q92665 395 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 ACTR8Q9H981 624 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 GEMIN8Q9NWZ8 242 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 VWA7Q9Y334 891 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 FARP1Q9Y4F1 1045 aaPredicted RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 ANKRD12Q6UB98 2062 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 HSPA1AP0DMV8 641 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 HSPA1BP0DMV9 641 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 KCNA10Q16322 511 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 IRGCQ6NXR0 463 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 NET1Q7Z628 596 aaPredicted RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 CAND1Q86VP6 1230 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 HBEGFQ99075 208 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 TRMT13Q9NUP7 481 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 DDX18Q9NVP1 670 aaKnown RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 RCOR3Q9P2K3 495 aaPredicted RBP15.82■□□□□ 0.12
CUX1-211ENST00000546411 SEPT3Q9UH03 358 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 EGFL7Q9UHF1 273 aa15.82■□□□□ 0.12
CUX1-211ENST00000546411 CNTRLQ7Z7A1 2325 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 PLCH1Q4KWH8 1693 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 ZNF839A8K0R7 811 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 MEIS3P2A8K0S8 358 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 BEST1O76090 585 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 AMHP03971 560 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 CYP2C18P33260 490 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 GRIA3P42263 894 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 TAS2R39P59534 338 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 GK5Q6ZS86 529 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 ANKRD23Q86SG2 305 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 DHDDSQ86SQ9 333 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 MON1AQ86VX9 555 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 FAM228AQ86W67 206 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 DHFR2Q86XF0 187 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 HGH1Q9BTY7 390 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 FTHL17Q9BXU8 183 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 MCM8Q9UJA3 840 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 FBXW11Q9UKB1 542 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 NENFQ9UMX5 172 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 VPS9D1Q9Y2B5 631 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 MYH4Q9Y623 1939 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 ITGA7Q13683 1181 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 INTS6LQ5JSJ4 861 aaKnown RBP15.81■□□□□ 0.12
CUX1-211ENST00000546411 GPR158Q5T848 1215 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 CLEC6AQ6EIG7 209 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 POTEHQ6S545 545 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.81■□□□□ 0.126e-7■■■■■ 139.2
CUX1-211ENST00000546411 CRYBG2Q8N1P7 616 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 MYO1HQ8N1T3 1032 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 SIKE1Q9BRV8 207 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 C1orf50Q9BV19 199 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 GBA3Q9H227 469 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 WDR70Q9NW82 654 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 ZNF197O14709 1029 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 TYROBPO43914 113 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 LRG1P02750 347 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 ALBP02768 609 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 CTPS1P17812 591 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 EDNRBP24530 442 aa15.81■□□□□ 0.12
CUX1-211ENST00000546411 CDH5P33151 784 aaPredicted RBP15.81■□□□□ 0.12
CUX1-211ENST00000546411 SOX4Q06945 474 aaPredicted RBP15.81■□□□□ 0.12
CUX1-211ENST00000546411 BFSP2Q13515 415 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms