RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ABCB8Q9NUT2 735 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 TMEM248Q9NWD8 314 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 MPP6Q9NZW5 540 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF212Q9UDV6 495 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 GGA2Q9UJY4 613 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 CLEC4EQ9ULY5 219 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 NDRG2Q9UN36 371 aaKnown RBP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 SLC27A6Q9Y2P4 619 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 MRPS17Q9Y2R5 130 aaKnown RBP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.49□□□□□ -1.37
PRKDC-211ENST00000546304 WDR87Q6ZQQ6 2873 aa6.49□□□□□ -1.37
PRKDC-211ENST00000546304 MYO15AQ9UKN7 3530 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 KANSL1LA0AUZ9 987 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CCDC66A2RUB6 948 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 TMEM221A6NGB7 291 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 DRGXA6NNA5 263 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 USP27XA6NNY8 438 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 MIF4GDA9UHW6 222 aaKnown RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF487B1APH4 448 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PI4K2BG5E9Z4 385 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 M0R296 226 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 TRIM24O15164 1050 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 WNT11O96014 354 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PDGFBP01127 241 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 APODP05090 189 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CELA3AP09093 270 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 DRD1P21728 446 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CD72P21854 359 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CTNNA2P26232 953 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 OR1E1P30953 314 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CD70P32970 193 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CSKP41240 450 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 GRIA2P42262 883 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 SLC6A11P48066 632 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 DNA2P51530 1060 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 ARSEP51690 589 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 GP2P55259 537 aaKnown RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 OXCT1P55809 520 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 GRSF1Q12849 480 aaKnown RBP eCLIP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 LMAN2Q12907 356 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF177Q13360 481 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 LRRC32Q14392 662 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 UBXN2BQ14CS0 331 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 EIF4HQ15056 248 aaKnown RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PDK2Q15119 407 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 GEN1Q17RS7 908 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PLEKHG6Q3KR16 790 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 ATP13A4Q4VNC1 1196 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 ODF2Q5BJF6 829 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 FSCBQ5H9T9 825 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PITRM1Q5JRX3 1037 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 FSTL4Q6MZW2 842 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 SETD3Q86TU7 594 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 NT5DC3Q86UY8 548 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 VSIG1Q86XK7 387 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 MAP7D3Q8IWC1 876 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 SFTPA1Q8IWL2 248 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 REXO1L1PQ8IX06 675 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CCDC105Q8IYK2 499 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 KATNAL2Q8IYT4 538 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 NPWQ8N729 165 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 DCAF4L2Q8NA75 395 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 KCTD6Q8NC69 237 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 FLCNQ8NFG4 579 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 OR52K2Q8NGK3 314 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 FIBINQ8TAL6 211 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 FAM71BQ8TC56 605 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 RAPGEF5Q92565 580 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 ALG3Q92685 438 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 FAF2Q96CS3 445 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 TRIM44Q96DX7 344 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 RBM41Q96IZ5 413 aaKnown RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PNKPQ96T60 521 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CIPCQ9C0C6 399 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 RETREG1Q9H6L5 497 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 TRMT1Q9NXH9 659 aaKnown RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 DDX56Q9NY93 547 aaKnown RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 DONSONQ9NYP3 566 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 CWC15Q9P013 229 aaKnown RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 VPS28Q9UK41 221 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 FBXO10Q9UK96 956 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 AMFRQ9UKV5 643 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PCOLCE2Q9UKZ9 415 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PACSIN2Q9UNF0 486 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-211ENST00000546304 TBC1D30Q9Y2I9 924 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 SPAG17Q6Q759 2223 aa6.48□□□□□ -1.37
PRKDC-211ENST00000546304 PLXND1Q9Y4D7 1925 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 DMDP11532 3685 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 ILVBLA1L0T0 632 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 TBC1D3BA6NDS4 549 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 C3orf70A6NLC5 250 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 WASH4PA8MWX3 477 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 PRRT4C9JH25 899 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 DCLK1O15075 740 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 DAPK3O43293 454 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 MFSD11O43934 449 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 KIF5CO60282 957 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 RAMP2O60895 175 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 EGFP01133 1207 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms