RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 GRM3Q14832 879 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 RPS6KA1Q15418 735 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 WDR45BQ5MNZ6 344 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 CFAP58Q5T655 872 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 NCEH1Q6PIU2 408 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 RGL4Q8IZJ4 473 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 OR2T34Q8NGX1 318 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 SNX19Q92543 992 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 HAUS1Q96CS2 278 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 HES6Q96HZ4 224 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 CPEB1Q9BZB8 566 aaKnown RBP17.04■□□□□ 0.32
LTBR-215ENST00000546296 BRD8Q9H0E9 1235 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 PCED1AQ9H1Q7 454 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 C6orf106Q9H6K1 298 aaPredicted RBP17.04■□□□□ 0.32
LTBR-215ENST00000546296 ATP13A3Q9H7F0 1226 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 NT5MQ9NPB1 228 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 SCUBE2Q9NQ36 999 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 RBM22Q9NW64 420 aaKnown RBP eCLIP17.04■□□□□ 0.32
LTBR-215ENST00000546296 EFR3BQ9Y2G0 817 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 CHD5Q8TDI0 1954 aa17.04■□□□□ 0.32
LTBR-215ENST00000546296 NUP205Q92621 2012 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 C16orf96A6NNT2 1141 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 METTL12A8MUP2 240 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 MUSKO15146 869 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 TJP3O95049 919 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 JCHAINP01591 159 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 ITPKAP23677 461 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 MAPK8P45983 427 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 NEK3P51956 506 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 ADPRHP54922 357 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 PPIDQ08752 370 aaKnown RBP17.03■□□□□ 0.32
LTBR-215ENST00000546296 AGBL4Q5VU57 503 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 DCAF12L1Q5VU92 463 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 AADACL2Q6P093 401 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 BBS12Q6ZW61 710 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 ALYREFQ86V81 257 aaKnown RBP17.03■□□□□ 0.32
LTBR-215ENST00000546296 SLC41A1Q8IVJ1 513 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 DCLK2Q8N568 766 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 TEX26Q8N6G2 289 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 TRIM58Q8NG06 486 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 MAML1Q92585 1016 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 FATE1Q969F0 183 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 TUBGCP5Q96RT8 1024 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 SUV39H2Q9H5I1 410 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 TRMT1Q9NXH9 659 aaKnown RBP17.03■□□□□ 0.32
LTBR-215ENST00000546296 SEPT10Q9P0V9 454 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 TTLL3Q9Y4R7 772 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 PCDHGA5Q9Y5G8 931 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 FANCMQ8IYD8 2048 aa17.03■□□□□ 0.32
LTBR-215ENST00000546296 TTC24A2A3L6 582 aaPredicted RBP17.02■□□□□ 0.32
LTBR-215ENST00000546296 BCLAF3A2AJT9 711 aaKnown RBP17.02■□□□□ 0.32
LTBR-215ENST00000546296 KCNK1O00180 336 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 PIGNO95427 931 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 PECAM1P16284 738 aaPredicted RBP17.02■□□□□ 0.32
LTBR-215ENST00000546296 XPAP23025 273 aaPredicted RBP17.02■□□□□ 0.32
LTBR-215ENST00000546296 SERPINA4P29622 427 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 PTPN7P35236 360 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 DPP6P42658 865 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 MAXP61244 160 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 AP1S1P61966 158 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 BCL2L1Q07817 233 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 CCDC6Q16204 474 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 PIP5KL1Q5T9C9 394 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 MEI1Q5TIA1 1274 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 KIAA0895LQ68EN5 471 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 B4GALNT4Q76KP1 1039 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 PARS2Q7L3T8 475 aaKnown RBP17.02■□□□□ 0.32
LTBR-215ENST00000546296 TTC7BQ86TV6 843 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 ZC3H18Q86VM9 953 aaKnown RBP17.02■□□□□ 0.32
LTBR-215ENST00000546296 CAMK1DQ8IU85 385 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 PGBD5Q8N414 524 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.02■□□□□ 0.32
LTBR-215ENST00000546296 TFB1MQ8WVM0 346 aaKnown RBP17.02■□□□□ 0.32
LTBR-215ENST00000546296 ZNF641Q96N77 438 aaPredicted RBP17.02■□□□□ 0.32
LTBR-215ENST00000546296 OLFM3Q96PB7 478 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 NUDCD1Q96RS6 583 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 MIR1-1HGQ9H1L0 117 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 KDM4CQ9H3R0 1056 aa17.02■□□□□ 0.32
LTBR-215ENST00000546296 NYNRINQ9P2P1 1898 aaKnown RBP17.01■□□□□ 0.31
LTBR-215ENST00000546296 EML5Q05BV3 1969 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.01■□□□□ 0.31
LTBR-215ENST00000546296 GOLGA6L9A6NEM1 432 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 H7C0C1 242 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 APOC4-APOC2K7ER74 178 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 NEMP1O14524 444 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 PLRG1O43660 514 aaKnown RBP17.01■□□□□ 0.31
LTBR-215ENST00000546296 GJB3O75712 270 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 PCDH8O95206 1070 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 APOC2P02655 101 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 ADRB3P13945 408 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 MAOBP27338 520 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 MPLP40238 635 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 ATP5OP48047 213 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 SPEM2Q0P670 501 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 SYT12Q8IV01 421 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 MGME1Q9BQP7 344 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 POLR1EQ9GZS1 481 aaKnown RBP17.01■□□□□ 0.31
LTBR-215ENST00000546296 NOD2Q9HC29 1040 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 PREBQ9HCU5 417 aa17.01■□□□□ 0.31
LTBR-215ENST00000546296 AMACRQ9UHK6 382 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms