RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 HDAC10Q969S8 669 aa10.47□□□□□ -0.73
SOD2-216ENST00000546260 CENPNQ96H22 339 aaPredicted RBP10.47□□□□□ -0.73
SOD2-216ENST00000546260 ATP13A3Q9H7F0 1226 aa10.47□□□□□ -0.73
SOD2-216ENST00000546260 RSAD1Q9HA92 442 aa10.47□□□□□ -0.73
SOD2-216ENST00000546260 ZNF304Q9HCX3 659 aa10.47□□□□□ -0.73
SOD2-216ENST00000546260 FAM49BQ9NUQ9 324 aa10.47□□□□□ -0.73
SOD2-216ENST00000546260 THG1LQ9NWX6 298 aaKnown RBP10.47□□□□□ -0.73
SOD2-216ENST00000546260 CCDC59Q9P031 241 aaKnown RBP10.47□□□□□ -0.73
SOD2-216ENST00000546260 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.47□□□□□ -0.73
SOD2-216ENST00000546260 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
SOD2-216ENST00000546260 CASZ1Q86V15 1759 aa10.47□□□□□ -0.73
SOD2-216ENST00000546260 LOC102724428A0A0B4J2F2 783 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 PRSS51A0A1B0GVH4 220 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 LOC110117498-PIK3R3F6TDL0 507 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 RFPL1O75677 317 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 SNAP29O95721 258 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 PIM1P11309 404 aaPredicted RBP10.46□□□□□ -0.73
SOD2-216ENST00000546260 SIK1P57059 783 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 CHRNB3Q05901 458 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 TOP3AQ13472 1001 aaPredicted RBP10.46□□□□□ -0.73
SOD2-216ENST00000546260 NAB1Q13506 487 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 ZNF568Q3ZCX4 644 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 LRP10Q7Z4F1 713 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 APOL4Q9BPW4 351 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 AIFM2Q9BRQ8 373 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 SLC25A23Q9BV35 468 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 HOXD1Q9GZZ0 328 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 MRPL39Q9NYK5 338 aaKnown RBP10.46□□□□□ -0.73
SOD2-216ENST00000546260 PDE10AQ9Y233 779 aa10.46□□□□□ -0.73
SOD2-216ENST00000546260 B8ZZF3 427 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 ZBTB7AO95365 584 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 IL1R1P14778 569 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 CASP3P42574 277 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 NFYCQ13952 458 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 TXNRD3NBQ6F5E7 133 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 KLHL17Q6TDP4 642 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 ZDHHC13Q8IUH4 622 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 UNC5BQ8IZJ1 945 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 DNAJB14Q8TBM8 379 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 C8orf37Q96NL8 207 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 MUS81Q96NY9 551 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 CPNE5Q9HCH3 593 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 EXD2Q9NVH0 621 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 ASNSD1Q9NWL6 643 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 RAP2CQ9Y3L5 183 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 PPME1Q9Y570 386 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 GAKO14976 1311 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 PEAK1Q9H792 1746 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 ATP6V1G2-DDX39BF2Z307 99 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 SLCO1B7G3V0H7 640 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 HOXC11O43248 304 aaPredicted RBP10.46□□□□□ -0.74
SOD2-216ENST00000546260 FGF3P11487 239 aaPredicted RBP10.46□□□□□ -0.74
SOD2-216ENST00000546260 BDNFP23560 247 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 RRM2P31350 389 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 EPHX2P34913 555 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 SNRPD2P62316 118 aaKnown RBP10.46□□□□□ -0.74
SOD2-216ENST00000546260 AP3B2Q13367 1082 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 CAPRIN1Q14444 709 aaKnown RBP10.46□□□□□ -0.74
SOD2-216ENST00000546260 TEX44Q53QW1 395 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 TTC23Q5W5X9 447 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 SPATC1Q76KD6 591 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 R3HCC1LQ7Z5L2 792 aaKnown RBP10.46□□□□□ -0.74
SOD2-216ENST00000546260 CDKL3Q8IVW4 592 aaPredicted RBP10.46□□□□□ -0.74
SOD2-216ENST00000546260 ABRAQ8N0Z2 381 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 WDR11Q9BZH6 1224 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 ELOVL6Q9H5J4 265 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 RETREG1Q9H6L5 497 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 CAB39LQ9H9S4 337 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 PNPLA8Q9NP80 782 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 CD320Q9NPF0 282 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 KCNN3Q9UGI6 736 aa10.46□□□□□ -0.74
SOD2-216ENST00000546260 ACSL4O60488 711 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 FAM20BO75063 409 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 SCO1O75880 301 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 POLBP06746 335 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 C8BP07358 591 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 HDCP19113 662 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 TFEBP19484 476 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 PPIL2Q13356 520 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 BMT2Q1RMZ1 405 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 CCDC149Q6ZUS6 474 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 THNSL1Q8IYQ7 743 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 OR8H3Q8N146 312 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 FAM109AQ8N4B1 249 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 SVOPQ8N4V2 548 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 SMG8Q8ND04 991 aaKnown RBP10.45□□□□□ -0.74
SOD2-216ENST00000546260 SNAPC3Q92966 411 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 FEM1AQ9BSK4 669 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 NANOGQ9H9S0 305 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 CPSF3Q9UKF6 684 aaKnown RBP10.45□□□□□ -0.74
SOD2-216ENST00000546260 CNOT11Q9UKZ1 510 aaKnown RBP10.45□□□□□ -0.74
SOD2-216ENST00000546260 PCDHB12Q9Y5F1 795 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 NFAT5O94916 1531 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 A0A1W2PRG6 482 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 MYO1GB0I1T2 1018 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 SNNO75324 88 aaPredicted RBP10.45□□□□□ -0.74
SOD2-216ENST00000546260 PGLSO95336 258 aa10.45□□□□□ -0.74
SOD2-216ENST00000546260 F7P08709 466 aaPredicted RBP10.45□□□□□ -0.74
SOD2-216ENST00000546260 SOX6P35712 828 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms