RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 SLC6A18Q96N87 628 aa12.04□□□□□ -0.48
YBX3-217ENST00000546164 SP110Q9HB58 689 aa12.04□□□□□ -0.48
YBX3-217ENST00000546164 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
YBX3-217ENST00000546164 FADS3Q9Y5Q0 445 aa12.04□□□□□ -0.48
YBX3-217ENST00000546164 A0A1W2PR77 199 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 TSPAN11A1L157 253 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 ZNF487B1APH4 448 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 RNGTTO60942 597 aaKnown RBP12.03□□□□□ -0.48
YBX3-217ENST00000546164 PALMO75781 387 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 CER1O95813 267 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 PEX11BO96011 259 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 UGT2B4P06133 528 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 CDC25BP30305 580 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 CYLC1P35663 651 aaPredicted RBP12.03□□□□□ -0.48
YBX3-217ENST00000546164 CTSKP43235 329 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 MAGEA1P43355 309 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 NSUN2Q08J23 767 aaKnown RBP eCLIP12.03□□□□□ -0.48
YBX3-217ENST00000546164 OVGP1Q12889 678 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 MESDQ14696 234 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 PAFAH1B3Q15102 231 aaKnown RBP12.03□□□□□ -0.48
YBX3-217ENST00000546164 KIF19Q2TAC6 998 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 ZNF284Q2VY69 593 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 ATP13A4Q4VNC1 1196 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 SETMARQ53H47 684 aaPredicted RBP12.03□□□□□ -0.48
YBX3-217ENST00000546164 KIAA1161Q6NSJ0 714 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 FBXL19Q6PCT2 694 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 GDPD4Q6W3E5 623 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 ARHGAP36Q6ZRI8 547 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 PIP4P1Q86T03 277 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 IQCHQ86VS3 1027 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 VSIG1Q86XK7 387 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 TMTC1Q8IUR5 882 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 TP53INP2Q8IXH6 220 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 TMEM145Q8NBT3 493 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 KCTD6Q8NC69 237 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 PCDH19Q8TAB3 1148 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 HCAR2Q8TDS4 363 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 SKA1Q96BD8 255 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 KLHL32Q96NJ5 620 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 PSKH2Q96QS6 385 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 LUC7LQ9NQ29 371 aaKnown RBP12.03□□□□□ -0.48
YBX3-217ENST00000546164 SEPT3Q9UH03 358 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 ANKRD6Q9Y2G4 727 aa12.03□□□□□ -0.48
YBX3-217ENST00000546164 A0A0A6YYK5 440 aaPredicted RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 A0A1W2PQU0 124 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 PRAMEF26H0Y7S4 382 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 WNT9AO14904 365 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 AREL1O15033 823 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 TSPAN6O43657 245 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 MAFKO60675 156 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 WNT1P04628 370 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 CD59P13987 128 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 CD38P28907 300 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 HSPA9P38646 679 aaKnown RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 ABL2P42684 1182 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 RENBPP51606 427 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 SUOXP51687 545 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 RPS21P63220 83 aaKnown RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 LBRQ14739 615 aaKnown RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 SPA17Q15506 151 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 ZNF423Q2M1K9 1284 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 HLA-BQ31612 363 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 UAP1L1Q3KQV9 507 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 SLC45A4Q5BKX6 768 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 ANKRD20A8PQ5CZ79 823 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 PPM1JQ5JR12 505 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 NCBP2-AS2Q69YL0 99 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 ADAT2Q7Z6V5 191 aaKnown RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 MFSD2AQ8NA29 543 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 NETO2Q8NC67 525 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 TSEN2Q8NCE0 465 aaKnown RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 OR2I1PQ8NGU4 316 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 SERAC1Q96JX3 654 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 EXOC2Q96KP1 924 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 ZNF641Q96N77 438 aaPredicted RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 TUBGCP5Q96RT8 1024 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 CALN1Q9BXU9 219 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 GAREM1Q9H706 876 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 ZFR2Q9UPR6 939 aaKnown RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 PCDHGB2Q9Y5G2 931 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 PCDHA13Q9Y5I0 950 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 SNX11Q9Y5W9 270 aa12.02□□□□□ -0.49
YBX3-217ENST00000546164 EPN1Q9Y6I3 576 aaPredicted RBP12.02□□□□□ -0.49
YBX3-217ENST00000546164 PCNX2A6NKB5 2137 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 TMEM110-MUSTN1A8MSY1 372 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 INSIG1O15503 277 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 SPINT1O43278 529 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 DFNA5O60443 496 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 PCDH8O95206 1070 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 KCNK5O95279 499 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 NDUFA10O95299 355 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 CEACAM1P13688 526 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 KDELR1P24390 212 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 MAT2AP31153 395 aaKnown RBP12.01□□□□□ -0.49
YBX3-217ENST00000546164 GJC1P36383 396 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 RGRP47804 291 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 C21orf59P57076 290 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 AP1S1P61966 158 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms