RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ITM2BQ9Y287 266 aa16.95■□□□□ 0.3
CPSF7-225ENST00000545934 LMO7DNF2Z398 122 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 NTN3O00634 580 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-225ENST00000545934 AREL1O15033 823 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 SRGAP2O75044 1071 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 PNMA6AP0CW24 399 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-225ENST00000545934 IGFALSP35858 605 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 YPEL5P62699 121 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 ARL13BQ3SXY8 428 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 ZNF805Q5CZA5 627 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 XYLT1Q86Y38 959 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 NAT6Q93015 286 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 C18orf8Q96DM3 657 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 CLPBQ9H078 707 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 ZDHHC6Q9H6R6 413 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 APOBEC3BQ9UH17 382 aaKnown RBP16.94■□□□□ 0.3
CPSF7-225ENST00000545934 RWDD2AQ9UIY3 292 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 TMEM59LQ9UK28 342 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 DNAJC12Q9UKB3 198 aa16.94■□□□□ 0.3
CPSF7-225ENST00000545934 CCDC187A0A096LP49 1063 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 MUSKO15146 869 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 EFSO43281 561 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 ITGA2BP08514 1039 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 GKP32189 559 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 ACVRL1P37023 503 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 RPIAP49247 311 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 DNA2P51530 1060 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 ADKP55263 362 aaKnown RBP16.93■□□□□ 0.3
CPSF7-225ENST00000545934 NRG1Q02297 640 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-225ENST00000545934 PTK2BQ14289 1009 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 FAM102AQ5T9C2 384 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-225ENST00000545934 MANEALQ5VSG8 457 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 CCDC81Q6ZN84 652 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 ARCQ7LC44 396 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 PHACTR4Q8IZ21 702 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 ARL14Q8N4G2 192 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 TMEM35BQ8NCS4 154 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 ARHGEF2Q92974 986 aaKnown RBP16.93■□□□□ 0.3
CPSF7-225ENST00000545934 GLMNQ92990 594 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 LIN37Q96GY3 246 aaPredicted RBP16.93■□□□□ 0.3
CPSF7-225ENST00000545934 CCDC3Q9BQI4 270 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 TM6SF2Q9BZW4 377 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 CLMPQ9H6B4 373 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 NDFIP2Q9NV92 336 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 NEU3Q9UQ49 428 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 UNC13CQ8NB66 2214 aa16.93■□□□□ 0.3
CPSF7-225ENST00000545934 PIEZO2Q9H5I5 2752 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 TOR1BO14657 336 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 YY2O15391 372 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 TNFSF15O95150 251 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 GSRP00390 522 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 C1orf61Q13536 156 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 PRRT3Q5FWE3 981 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 MACC1Q6ZN28 852 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 NLRP14Q86W24 1093 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 DRC7Q8IY82 874 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 TP53I13Q8NBR0 393 aaPredicted RBP16.92■□□□□ 0.3
CPSF7-225ENST00000545934 OR2AP1Q8NGE2 309 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 OR6K2Q8NGY2 324 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 OSBPL1AQ9BXW6 950 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 RETREG1Q9H6L5 497 aa16.92■□□□□ 0.3
CPSF7-225ENST00000545934 TSHRP16473 764 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 THOP1P52888 689 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 BPIFB4P59827 614 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 FAM131BQ86XD5 332 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 ARHGEF26Q96DR7 871 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 CFAP57Q96MR6 1250 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 MBNL1Q9NR56 388 aaKnown RBP16.91■□□□□ 0.3
CPSF7-225ENST00000545934 ACSL6Q9UKU0 697 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 ATXN7L1Q9ULK2 861 aaPredicted RBP16.91■□□□□ 0.3
CPSF7-225ENST00000545934 PADI4Q9UM07 663 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 PCDHGA7Q9Y5G6 932 aa16.91■□□□□ 0.3
CPSF7-225ENST00000545934 BOD1L1Q8NFC6 3051 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 PYCARD-AS1I3L0S3 204 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 NEMP1O14524 444 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 NOBOXO60393 691 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 WISP1O95388 367 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 POP4O95707 220 aaKnown RBP16.9■□□□□ 0.3
CPSF7-225ENST00000545934 UGT2B4P06133 528 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 ANXA6P08133 673 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 CYP11B1P15538 503 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 ETFBP38117 255 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 MAPKAPK2P49137 400 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 GEMIN4P57678 1058 aaKnown RBP16.9■□□□□ 0.3
CPSF7-225ENST00000545934 SNRPD1P62314 119 aaKnown RBP16.9■□□□□ 0.3
CPSF7-225ENST00000545934 SPIDRQ14159 915 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 MYLK3Q32MK0 819 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 RAB6CQ53S08 254 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 B3GNT8Q7Z7M8 397 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 EXD3Q8N9H8 876 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 KLHL32Q96NJ5 620 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 CCNL2Q96S94 520 aaPredicted RBP16.9■□□□□ 0.3
CPSF7-225ENST00000545934 SLC13A1Q9BZW2 595 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 RAB6CQ9H0N0 254 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 RABGEF1Q9UJ41 708 aa16.9■□□□□ 0.3
CPSF7-225ENST00000545934 ARHGEF17Q96PE2 2063 aaPredicted RBP16.89■□□□□ 0.29
CPSF7-225ENST00000545934 KRIT1O00522 736 aa16.89■□□□□ 0.29
CPSF7-225ENST00000545934 SLC28A2O43868 658 aa16.89■□□□□ 0.29
CPSF7-225ENST00000545934 TM7SF2O76062 418 aa16.89■□□□□ 0.29
CPSF7-225ENST00000545934 LSM8O95777 96 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms