RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 NPHS1O60500 1241 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 SPATA31D3P0C874 917 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 ARSAP15289 507 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 CCNCP24863 283 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 ADRA1AP35348 466 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 SLC1A2P43004 574 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 CRYBB1P53674 252 aaPredicted RBP15.45■□□□□ 0.06
CNN3-207ENST00000545882 IRF5Q13568 498 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 SPATA31D4Q6ZUB0 917 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 PELI3Q8N2H9 469 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 CCNYL1Q8N7R7 359 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 TMEM102Q8N9M5 508 aaPredicted RBP15.45■□□□□ 0.06
CNN3-207ENST00000545882 IPMKQ8NFU5 416 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 HEXDCQ8WVB3 486 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 LRGUKQ96M69 825 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 PRICKLE1Q96MT3 831 aaPredicted RBP15.45■□□□□ 0.06
CNN3-207ENST00000545882 PARK7Q99497 189 aaKnown RBP15.45■□□□□ 0.06
CNN3-207ENST00000545882 IL12RB2Q99665 862 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 PTPN18Q99952 460 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 FICDQ9BVA6 458 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 GLOD4Q9HC38 313 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 AP4B1Q9Y6B7 739 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 PTCH2Q9Y6C5 1203 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 DFFAO00273 331 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 AURKAO14965 403 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 TFAP2AP05549 437 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 STMN1P16949 149 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 LHX1P48742 406 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 POLD2P49005 469 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 PSEN2P49810 448 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 ATXN3P54252 364 aaPredicted RBP15.45■□□□□ 0.06
CNN3-207ENST00000545882 CDKL1Q00532 357 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 MYBPC1Q00872 1141 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 ZNF33AQ06730 810 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 EIF4EBP2Q13542 120 aaPredicted RBP15.45■□□□□ 0.06
CNN3-207ENST00000545882 UGP2Q16851 508 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 TWF2Q6IBS0 349 aaKnown RBP15.45■□□□□ 0.06
CNN3-207ENST00000545882 ISLR2Q6UXK2 745 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 GK5Q6ZS86 529 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 FAM156AQ8NDB6 213 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 ADCY4Q8NFM4 1077 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 SGF29Q96ES7 293 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 RTP3Q9BQQ7 232 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 CSNK1G1Q9HCP0 422 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 TNFRSF12AQ9NP84 129 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 TREX1Q9NSU2 369 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 AAR2Q9Y312 384 aaKnown RBP15.45■□□□□ 0.06
CNN3-207ENST00000545882 TCAF1Q9Y4C2 921 aa15.45■□□□□ 0.06
CNN3-207ENST00000545882 SMIM31A0A1B0GVY4 71 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 NEMP2A6NFY4 417 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 RNASEH2AO75792 299 aaKnown RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 SRGAP2BP0DMP2 458 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 HSPA1AP0DMV8 641 aaKnown RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 HSPA1BP0DMV9 641 aaKnown RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 CLCNKBP51801 687 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 FKBP1BP68106 108 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 COG7P83436 770 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 SULT2A1Q06520 285 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 DYNC1I2Q13409 638 aaKnown RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 ART3Q13508 389 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 CNGA3Q16281 694 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 SH2D4BQ5SQS7 431 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 RARS2Q5T160 578 aaKnown RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 METTL25Q8N6Q8 603 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 C2CD4AQ8NCU7 369 aaPredicted RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 DQX1Q8TE96 717 aaKnown RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 TMA16Q96EY4 203 aaKnown RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 MRPL46Q9H2W6 279 aaKnown RBP15.44■□□□□ 0.06
CNN3-207ENST00000545882 IGSF5Q9NSI5 407 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 PCDHGA7Q9Y5G6 932 aa15.44■□□□□ 0.06
CNN3-207ENST00000545882 TTC3P53804 2025 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 KCNU1A8MYU2 1149 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 VILLO15195 856 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 MAFKO60675 156 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 IGLV3-25P01717 112 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 HNRNPLP14866 589 aaKnown RBP eCLIP15.43■□□□□ 0.06
CNN3-207ENST00000545882 KCNA5P22460 613 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 CHRNA4P43681 627 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 DNAJB13P59910 316 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 RBM20Q5T481 1227 aaKnown RBP15.43■□□□□ 0.06
CNN3-207ENST00000545882 FAM219BQ5XKK7 198 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 RWDD4Q6NW29 188 aaKnown RBP15.43■□□□□ 0.06
CNN3-207ENST00000545882 TRIM67Q6ZTA4 783 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 CHSY3Q70JA7 882 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 TMEM86AQ8N2M4 240 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 SPPL2BQ8TCT7 592 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 DLG3Q92796 817 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 SMARCD1Q96GM5 515 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 ELMO2Q96JJ3 720 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 MRPL57Q9BQC6 102 aaKnown RBP15.43■□□□□ 0.06
CNN3-207ENST00000545882 SLC39A8Q9C0K1 460 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 POMKQ9H5K3 350 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 NDFIP2Q9NV92 336 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 CLIC5Q9NZA1 410 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.43■□□□□ 0.06
CNN3-207ENST00000545882 CDH9Q9ULB4 789 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 LZTS1Q9Y250 596 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 MRPL42Q9Y6G3 142 aaKnown RBP15.43■□□□□ 0.06
CNN3-207ENST00000545882 PCNTO95613 3336 aa15.43■□□□□ 0.06
CNN3-207ENST00000545882 HLA-DQB2P05538 268 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms