RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 PSEN2P49810 448 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 GRB14Q14449 540 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 PPP1R3AQ16821 1122 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 PM20D1Q6GTS8 502 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 TRIM67Q6ZTA4 783 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 ARHGAP12Q8IWW6 846 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 DQX1Q8TE96 717 aaKnown RBP15.98■□□□□ 0.15
LDLR-204ENST00000545707 HASPINQ8TF76 798 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 BRI3BPQ8WY22 251 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 SLC39A8Q9C0K1 460 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 SEMA6AQ9H2E6 1030 aa15.98■□□□□ 0.15
LDLR-204ENST00000545707 DMAP1Q9NPF5 467 aaPredicted RBP15.98■□□□□ 0.15
LDLR-204ENST00000545707 GNEQ9Y223 722 aaKnown RBP15.98■□□□□ 0.15
LDLR-204ENST00000545707 MTF2Q9Y483 593 aaPredicted RBP15.98■□□□□ 0.15
LDLR-204ENST00000545707 RNASEH2AO75792 299 aaKnown RBP15.97■□□□□ 0.15
LDLR-204ENST00000545707 TSPAN8P19075 237 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 HADHAP40939 763 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 RARS2Q5T160 578 aaKnown RBP15.97■□□□□ 0.15
LDLR-204ENST00000545707 LDLRAD1Q5T700 205 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 LINC00523Q86TU6 105 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 TLK2Q86UE8 772 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 ATPAF2Q8N5M1 289 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 NCSTNQ92542 709 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 ATP6V1E2Q96A05 226 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 MYLPFQ96A32 169 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 MS4A4AQ96JQ5 239 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 CCDC28BQ9BUN5 200 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 GLOD4Q9HC38 313 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 TMLHEQ9NVH6 421 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 VTI1BQ9UEU0 232 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 SFMBT1Q9UHJ3 866 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 LZTS1Q9Y250 596 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 CCL22O00626 93 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 RTN3O95197 1032 aaPredicted RBP15.97■□□□□ 0.15
LDLR-204ENST00000545707 F9P00740 461 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 TFAP2AP05549 437 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 CRYBB1P53674 252 aaPredicted RBP15.97■□□□□ 0.15
LDLR-204ENST00000545707 PCBP1Q15365 356 aaKnown RBP eCLIP15.97■□□□□ 0.15
LDLR-204ENST00000545707 IL23RQ5VWK5 629 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 DCLRE1AQ6PJP8 1040 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 MARVELD2Q8N4S9 558 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 PIP4K2CQ8TBX8 421 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 PHF21BQ96EK2 531 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 TMEM209Q96SK2 561 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 MRPL46Q9H2W6 279 aaKnown RBP15.97■□□□□ 0.15
LDLR-204ENST00000545707 NEU3Q9UQ49 428 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 AAR2Q9Y312 384 aaKnown RBP15.97■□□□□ 0.15
LDLR-204ENST00000545707 PLXNB2O15031 1838 aa15.97■□□□□ 0.15
LDLR-204ENST00000545707 A0A1B0GTW7 788 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 ACOT8O14734 319 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 DENRO43583 198 aaKnown RBP15.96■□□□□ 0.15
LDLR-204ENST00000545707 MAFKO60675 156 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 HLA-DQB2P05538 268 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 SCNN1GP51170 649 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 RALGDSQ12967 914 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 NRF1Q16656 503 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 TIGD5Q53EQ6 642 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 LAYNQ6UX15 382 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 METTL25Q8N6Q8 603 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 HMGCLL1Q8TB92 370 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 PDCD6IPQ8WUM4 868 aaKnown RBP15.96■□□□□ 0.15
LDLR-204ENST00000545707 OLFM1Q99784 485 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 OCEL1Q9H607 264 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 NSMCE4AQ9NXX6 385 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 FLRT1Q9NZU1 646 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 MPP6Q9NZW5 540 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 TTC24A2A3L6 582 aaPredicted RBP15.96■□□□□ 0.15
LDLR-204ENST00000545707 BCAS2O75934 225 aaPredicted RBP15.96■□□□□ 0.15
LDLR-204ENST00000545707 CSPG5O95196 566 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 MOCS2O96007 188 aaPredicted RBP15.96■□□□□ 0.15
LDLR-204ENST00000545707 LHX1P48742 406 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 C1QTNF8P60827 252 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 MYBPC1Q00872 1141 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 PTK2BQ14289 1009 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 SLC5A9Q2M3M2 681 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 LDB1Q86U70 411 aaPredicted RBP15.96■□□□□ 0.15
LDLR-204ENST00000545707 PPHLN1Q8NEY8 458 aaKnown RBP15.96■□□□□ 0.15
LDLR-204ENST00000545707 SMARCD1Q96GM5 515 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 RTP3Q9BQQ7 232 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 GRIP2Q9C0E4 1043 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 TRPC7Q9HCX4 862 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 RBM22Q9NW64 420 aaKnown RBP eCLIP15.96■□□□□ 0.152e-7■■■■□ 25.4
LDLR-204ENST00000545707 CCDC167Q9P0B6 97 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 FBXO5Q9UKT4 447 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 TCAF1Q9Y4C2 921 aa15.96■□□□□ 0.15
LDLR-204ENST00000545707 E7ENX8 843 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 TRPA1O75762 1119 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 THP07101 528 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 CTSHP09668 335 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 FGFR3P22607 806 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 SULT2A1Q06520 285 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 UGP2Q16851 508 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.95■□□□□ 0.14
LDLR-204ENST00000545707 RBM44Q6ZP01 1051 aaKnown RBP15.95■□□□□ 0.14
LDLR-204ENST00000545707 PLEKHH3Q7Z736 793 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 TICAM1Q8IUC6 712 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 HAPLN3Q96S86 360 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 PRPF18Q99633 342 aaKnown RBP15.95■□□□□ 0.14
LDLR-204ENST00000545707 FSD1LQ9BXM9 530 aa15.95■□□□□ 0.14
LDLR-204ENST00000545707 NCKIPSDQ9NZQ3 722 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms