RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 WARSP23381 471 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 YY1P25490 414 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 LMO2P25791 158 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 NUP107P57740 925 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 COG7P83436 770 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 NME3Q13232 169 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 FASTKQ14296 549 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 CYTH1Q15438 398 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 NRF1Q16656 503 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 DALRD3Q5D0E6 543 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 PPP4R4Q6NUP7 873 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 PKN3Q6P5Z2 889 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 ARMCX2Q7L311 632 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 HERC6Q8IVU3 1022 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 SIX6OS1Q8N1H7 587 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 NPWQ8N729 165 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 GOLM1Q8NBJ4 401 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 B3GALNT2Q8NCR0 500 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TNIP2Q8NFZ5 429 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 PPTC7Q8NI37 304 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 SPPL2BQ8TCT7 592 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 LRTOMTQ8WZ04 291 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 EMID1Q96A84 441 aaPredicted RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 SLCO4A1Q96BD0 722 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TSGA13Q96PP4 275 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TMEM79Q9BSE2 394 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TRPV6Q9H1D0 765 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 UPF3AQ9H1J1 476 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 CXCL16Q9H2A7 254 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 CLK4Q9HAZ1 481 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 WDR6Q9NNW5 1121 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 C8orf4Q9NR00 106 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 OLAHQ9NV23 265 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 ARMC1Q9NVT9 282 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 TMEM181Q9P2C4 612 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 CNOT6Q9ULM6 557 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 AAR2Q9Y312 384 aaKnown RBP8.85□□□□□ -0.99
TDP1-204ENST00000545686 GJA3Q9Y6H8 435 aa8.85□□□□□ -0.99
TDP1-204ENST00000545686 LTBP3Q9NS15 1303 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 NYNRINQ9P2P1 1898 aaKnown RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 A0A0G2JLL6 359 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 DYTNA2CJ06 578 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 FAM72CH0Y354 149 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 FZD9O00144 591 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 PSMD12O00232 456 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 HTRA2O43464 458 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 USP2O75604 605 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 SRP72O76094 671 aaKnown RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 SNRPB2P08579 225 aaKnown RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 F7P08709 466 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 FAM163BP0C2L3 166 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 TCN1P20061 433 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 GABRB3P28472 473 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 HOXA11P31270 313 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 ACADVLP49748 655 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 TAF6P49848 677 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 POU4F1Q01851 419 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 ARL13BQ3SXY8 428 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 MTX3Q5HYI7 312 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 FAM72AQ5TYM5 149 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 SYPL2Q5VXT5 272 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 FAM72DQ6L9T8 149 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 NOTUMQ6P988 496 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 PAOXQ6QHF9 649 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 POTEHQ6S545 545 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 ISLR2Q6UXK2 745 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 GADL1Q6ZQY3 521 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 TRIM67Q6ZTA4 783 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 PRRT2Q7Z6L0 340 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 FAM72BQ86X60 149 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 TOP6BLQ8N6T0 577 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 CCNYL1Q8N7R7 359 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 MFSD2AQ8NA29 543 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 TXNDC5Q8NBS9 432 aaKnown RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 FAM156AQ8NDB6 213 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 HMGCLL1Q8TB92 370 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 ADAMTS16Q8TE57 1224 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 LPGAT1Q92604 370 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 ROPN1LQ96C74 230 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 MOCOSQ96EN8 888 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 POMKQ9H5K3 350 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 GTSE1Q9NYZ3 720 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 FBXW11Q9UKB1 542 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.84□□□□□ -0.99
TDP1-204ENST00000545686 NRCAMQ92823 1304 aa8.84□□□□□ -0.99
TDP1-204ENST00000545686 SYNJ2BP-COX16A0A087WUM0 186 aa8.83□□□□□ -1
TDP1-204ENST00000545686 BBIP1A8MTZ0 92 aa8.83□□□□□ -1
TDP1-204ENST00000545686 FBP2O00757 339 aa8.83□□□□□ -1
TDP1-204ENST00000545686 UBDO15205 165 aa8.83□□□□□ -1
TDP1-204ENST00000545686 C7P10643 843 aa8.83□□□□□ -1
TDP1-204ENST00000545686 SAT1P21673 171 aa8.83□□□□□ -1
TDP1-204ENST00000545686 AVPR1AP37288 418 aa8.83□□□□□ -1
TDP1-204ENST00000545686 ATXN3P54252 364 aaPredicted RBP8.83□□□□□ -1
TDP1-204ENST00000545686 RAB15P59190 212 aa8.83□□□□□ -1
TDP1-204ENST00000545686 CDC42EP1Q00587 391 aa8.83□□□□□ -1
TDP1-204ENST00000545686 NHSL2Q5HYW2 709 aa8.83□□□□□ -1
TDP1-204ENST00000545686 C6orf10Q5SRN2 563 aa8.83□□□□□ -1
TDP1-204ENST00000545686 INTS11Q5TA45 600 aaKnown RBP8.83□□□□□ -1
TDP1-204ENST00000545686 KIAA0408Q6ZU52 694 aa8.83□□□□□ -1
TDP1-204ENST00000545686 ERO1BQ86YB8 467 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms