RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 EXOC2Q96KP1 924 aa15.94■□□□□ 0.14
CCDC78-216ENST00000544996 ZNF599Q96NL3 588 aa15.94■□□□□ 0.14
CCDC78-216ENST00000544996 CINPQ9BW66 212 aaPredicted RBP15.94■□□□□ 0.14
CCDC78-216ENST00000544996 LUC7LQ9NQ29 371 aaKnown RBP15.94■□□□□ 0.14
CCDC78-216ENST00000544996 TM7SF3Q9NS93 570 aa15.94■□□□□ 0.14
CCDC78-216ENST00000544996 LHX3Q9UBR4 397 aa15.94■□□□□ 0.14
CCDC78-216ENST00000544996 FADS3Q9Y5Q0 445 aa15.94■□□□□ 0.14
CCDC78-216ENST00000544996 NUMA1Q14980 2115 aa15.94■□□□□ 0.14
CCDC78-216ENST00000544996 PCDH15Q96QU1 1955 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 NYNRINQ9P2P1 1898 aaKnown RBP15.93■□□□□ 0.14
CCDC78-216ENST00000544996 SLC31A1O15431 190 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 TSPAN6O43657 245 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 MTA2O94776 668 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 CD59P13987 128 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 CTSKP43235 329 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 MAGEA1P43355 309 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 RENBPP51606 427 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 TAS2R40P59535 323 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 OVGP1Q12889 678 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 HNRNPDQ14103 355 aaKnown RBP15.93■□□□□ 0.14
CCDC78-216ENST00000544996 SUZ12Q15022 739 aaKnown RBP15.93■□□□□ 0.14
CCDC78-216ENST00000544996 CFAP58Q5T655 872 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 ARHGAP36Q6ZRI8 547 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 PIP4P1Q86T03 277 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 TTC7BQ86TV6 843 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 ATPAF2Q8N5M1 289 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 MFSD2AQ8NA29 543 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 HCAR2Q8TDS4 363 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 PANX2Q96RD6 677 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 TUBGCP5Q96RT8 1024 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 ZNF670Q9BS34 389 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 IL21RQ9HBE5 538 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 GDF3Q9NR23 364 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 ETNK2Q9NVF9 386 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 DKK3Q9UBP4 350 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 SEPT3Q9UH03 358 aa15.93■□□□□ 0.14
CCDC78-216ENST00000544996 FNDC3AQ9Y2H6 1198 aaKnown RBP15.93■□□□□ 0.14
CCDC78-216ENST00000544996 TLR4O00206 839 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 WNT9AO14904 365 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 WNT1P04628 370 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 CD48P09326 243 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 XPAP23025 273 aaPredicted RBP15.92■□□□□ 0.14
CCDC78-216ENST00000544996 IL4RP24394 825 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 AKT2P31751 481 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 CYLC1P35663 651 aaPredicted RBP15.92■□□□□ 0.14
CCDC78-216ENST00000544996 CSNK1DP48730 415 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 ARSEP51690 589 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 NSUN2Q08J23 767 aaKnown RBP eCLIP15.92■□□□□ 0.14
CCDC78-216ENST00000544996 MMRN1Q13201 1228 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 DPYSL3Q14195 570 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 TCEAL1Q15170 157 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 ZNF284Q2VY69 593 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 ATP13A4Q4VNC1 1196 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 TMCO4Q5TGY1 634 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 SEL1L3Q68CR1 1132 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 SRLQ86TD4 932 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 IQCHQ86VS3 1027 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 LRRC49Q8IUZ0 686 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 BBS5Q8N3I7 341 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 TSEN2Q8NCE0 465 aaKnown RBP15.92■□□□□ 0.14
CCDC78-216ENST00000544996 KLK6Q92876 244 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 ZNF641Q96N77 438 aaPredicted RBP15.92■□□□□ 0.14
CCDC78-216ENST00000544996 SLC17A9Q9BYT1 436 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 PCDHB9Q9Y5E1 797 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 PCDHGB2Q9Y5G2 931 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 DNAH14Q0VDD8 3507 aa15.92■□□□□ 0.14
CCDC78-216ENST00000544996 CHD5Q8TDI0 1954 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 A0A1W2PR77 199 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 KCNK3O14649 394 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 GIPC1O14908 333 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 INSIG1O15503 277 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 IPO7O95373 1038 aaKnown RBP15.91■□□□□ 0.14
CCDC78-216ENST00000544996 ADRB1P08588 477 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 PRLRP16471 622 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 HNRNPA2B1P22626 353 aaKnown RBP15.91■□□□□ 0.14
CCDC78-216ENST00000544996 SERPINA4P29622 427 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 SLC1A1P43005 524 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 NOP2P46087 812 aaKnown RBP15.91■□□□□ 0.14
CCDC78-216ENST00000544996 CCT8P50990 548 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 SUOXP51687 545 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 SGCGQ13326 291 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 ZNF235Q14590 738 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 LBRQ14739 615 aaKnown RBP15.91■□□□□ 0.14
CCDC78-216ENST00000544996 ZNF423Q2M1K9 1284 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 TMEM259Q4ZIN3 620 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 ODF2Q5BJF6 829 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 ANKRD20A8PQ5CZ79 823 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 CPNE8Q86YQ8 564 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 TMTC1Q8IUR5 882 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 NAXDQ8IW45 347 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 TP53INP2Q8IXH6 220 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 PAF1Q8N7H5 531 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 SETD7Q8WTS6 366 aaKnown RBP15.91■□□□□ 0.14
CCDC78-216ENST00000544996 VOPP1Q96AW1 172 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 PSKH2Q96QS6 385 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 SUV39H2Q9H5I1 410 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 ATP13A3Q9H7F0 1226 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 KLHL11Q9NVR0 708 aa15.91■□□□□ 0.14
CCDC78-216ENST00000544996 ZFR2Q9UPR6 939 aaKnown RBP15.91■□□□□ 0.14
CCDC78-216ENST00000544996 LAMA1P25391 3075 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms