RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 SLC31A1O15431 190 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 TPM1P09493 284 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 RARAP10276 462 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 GKP32189 559 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 EIF4A3P38919 411 aaKnown RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 CSNK1DP48730 415 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 ARRB1P49407 418 aaPredicted RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 SUOXP51687 545 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 RHOAP61586 193 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 FOXC1Q12948 553 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 RFTN1Q14699 578 aaPredicted RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 SHBQ15464 509 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 SLC18A3Q16572 532 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 TSR1Q2NL82 804 aaKnown RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 ATXN7L2Q5T6C5 722 aaPredicted RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 SEL1L3Q68CR1 1132 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 POLNQ7Z5Q5 900 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 SPATS2Q86XZ4 545 aaKnown RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 ARHGAP12Q8IWW6 846 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 OR6K2Q8NGY2 324 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 SAP25Q8TEE9 199 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 KLHDC7BQ96G42 594 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 CELF6Q96J87 481 aaKnown RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 KLHL32Q96NJ5 620 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 CNTNAP3BQ96NU0 1288 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 LENG8Q96PV6 779 aaPredicted RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 C1QTNF2Q9BXJ5 285 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 CNTNAP3Q9BZ76 1288 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 ZNHIT6Q9NWK9 470 aaKnown RBP14.11□□□□□ -0.15
VAMP1-208ENST00000544432 UVRAGQ9P2Y5 699 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 LHX3Q9UBR4 397 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 LCMT1Q9UIC8 334 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 ANAPC7Q9UJX3 599 aa14.11□□□□□ -0.15
VAMP1-208ENST00000544432 J3KR12 359 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 AREL1O15033 823 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 DKK1O94907 266 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 UGT2B4P06133 528 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 H2AFZP0C0S5 128 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 ARL4AP40617 200 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 SLC25A11Q02978 314 aaKnown RBP14.1□□□□□ -0.15
VAMP1-208ENST00000544432 IL10RBQ08334 325 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 NSUN2Q08J23 767 aaKnown RBP eCLIP14.1□□□□□ -0.15
VAMP1-208ENST00000544432 TMCO4Q5TGY1 634 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 H2AFVQ71UI9 128 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 RAB44Q7Z6P3 723 aaPredicted RBP14.1□□□□□ -0.15
VAMP1-208ENST00000544432 ABI3BPQ7Z7G0 1075 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 DCP2Q8IU60 420 aaKnown RBP14.1□□□□□ -0.15
VAMP1-208ENST00000544432 ADAMTS14Q8WXS8 1223 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 ZNF599Q96NL3 588 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 SLC17A9Q9BYT1 436 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 RCOR3Q9P2K3 495 aaPredicted RBP14.1□□□□□ -0.15
VAMP1-208ENST00000544432 APOBEC2Q9Y235 224 aaKnown RBP14.1□□□□□ -0.15
VAMP1-208ENST00000544432 BTBD3Q9Y2F9 522 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 NEUROG3Q9Y4Z2 214 aa14.1□□□□□ -0.15
VAMP1-208ENST00000544432 TSPAN11A1L157 253 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 TNFSF14O43557 240 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 FTH1P19P0C7X4 201 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 TCF4P15884 667 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 PRLRP16471 622 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 EPHA8P29322 1005 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-208ENST00000544432 ABL2P42684 1182 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 SGCGQ13326 291 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 FGL2Q14314 439 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 HADHQ16836 314 aaKnown RBP14.09□□□□□ -0.15
VAMP1-208ENST00000544432 PRAMEF14Q5SWL7 426 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 TXNRD3NBQ6F5E7 133 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 SARM1Q6SZW1 724 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 TTC7BQ86TV6 843 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 NPWQ8N729 165 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 ZNF564Q8TBZ8 553 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-208ENST00000544432 FAM71BQ8TC56 605 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 TSC1Q92574 1164 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 KLK6Q92876 244 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 IFT43Q96FT9 208 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 BTBD6Q96KE9 485 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 ZNF641Q96N77 438 aaPredicted RBP14.09□□□□□ -0.15
VAMP1-208ENST00000544432 CSPG4P5Q96PW8 444 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 TUBGCP5Q96RT8 1024 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 SCNM1Q9BWG6 230 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.09□□□□□ -0.15
VAMP1-208ENST00000544432 KLHL11Q9NVR0 708 aa14.09□□□□□ -0.15
VAMP1-208ENST00000544432 IPO11Q9UI26 975 aaKnown RBP14.09□□□□□ -0.15
VAMP1-208ENST00000544432 TRPM6Q9BX84 2022 aa14.08□□□□□ -0.15
VAMP1-208ENST00000544432 DOCK9Q9BZ29 2069 aa14.08□□□□□ -0.15
VAMP1-208ENST00000544432 IGLON5A6NGN9 336 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 NEMP1O14524 444 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 SPINT1O43278 529 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 PALMO75781 387 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 PROSCO94903 275 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 PAK4O96013 591 aaPredicted RBP14.08□□□□□ -0.16
VAMP1-208ENST00000544432 ITGAVP06756 1048 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 TMEM253P0C7T8 217 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 THEGLP0DJG4 465 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 TIMP2P16035 220 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 AMPD1P23109 780 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 RENBPP51606 427 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 SMTNL2Q2TAL5 461 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 TMCO3Q6UWJ1 677 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 GCNT7Q6ZNI0 430 aa14.08□□□□□ -0.16
VAMP1-208ENST00000544432 KANSL1Q7Z3B3 1105 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms