RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ZNF806P0C7X5 589 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 HSPA9P38646 679 aaKnown RBP19.37■□□□□ 0.69
DDX55-211ENST00000544429 DPP6P42658 865 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 NR2C2P49116 596 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 CREB5Q02930 508 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 GRM3Q14832 879 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 CSRP2Q16527 193 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 DCAF12L1Q5VU92 463 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 ALG1LQ6GMV1 187 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 TIGD7Q6NT04 549 aaPredicted RBP19.37■□□□□ 0.69
DDX55-211ENST00000544429 GDPD4Q6W3E5 623 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 PARS2Q7L3T8 475 aaKnown RBP19.37■□□□□ 0.69
DDX55-211ENST00000544429 ARMCX6Q7L4S7 300 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 PEX26Q7Z412 305 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 CYP2U1Q7Z449 544 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 RFX6Q8HWS3 928 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.37■□□□□ 0.69
DDX55-211ENST00000544429 HCAR2Q8TDS4 363 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 GANCQ8TET4 914 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 SPOCK2Q92563 424 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 TUBGCP5Q96RT8 1024 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 HERPUD2Q9BSE4 406 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 CINPQ9BW66 212 aaPredicted RBP19.37■□□□□ 0.69
DDX55-211ENST00000544429 MAK16Q9BXY0 300 aaKnown RBP19.37■□□□□ 0.69
DDX55-211ENST00000544429 DKK3Q9UBP4 350 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 AMFRQ9UKV5 643 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 GUCA1BQ9UMX6 200 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 PPP2R2CQ9Y2T4 447 aa19.37■□□□□ 0.69
DDX55-211ENST00000544429 TRPM6Q9BX84 2022 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 LRRC72A6NJI9 287 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 SPINT1O43278 529 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 AP1G1O43747 822 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 NRDCO43847 1150 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 CST8O60676 142 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 FTCDO95954 541 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 UGT2B4P06133 528 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 ADRB3P13945 408 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 TGM2P21980 687 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 RENBPP51606 427 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 CCR5P51681 352 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 NEK3P51956 506 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 RWDD2BP57060 319 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 RAD51Q06609 339 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 SPEM2Q0P670 501 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 ODF2Q5BJF6 829 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 MARC1Q5VT66 337 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 KIAA0895LQ68EN5 471 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 NPNTQ6UXI9 565 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 BBS12Q6ZW61 710 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 SRLQ86TD4 932 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 RYBPQ8N488 228 aaPredicted RBP19.36■□□□□ 0.69
DDX55-211ENST00000544429 GPR161Q8N6U8 529 aaKnown RBP19.36■□□□□ 0.69
DDX55-211ENST00000544429 OR14C36Q8NHC7 312 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 ECHDC3Q96DC8 303 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 ZNF641Q96N77 438 aaPredicted RBP19.36■□□□□ 0.69
DDX55-211ENST00000544429 PREBQ9HCU5 417 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 VPS45Q9NRW7 570 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 SEMA4GQ9NTN9 838 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 AMACRQ9UHK6 382 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 TPX2Q9ULW0 747 aaKnown RBP19.36■□□□□ 0.69
DDX55-211ENST00000544429 HEY1Q9Y5J3 304 aa19.36■□□□□ 0.69
DDX55-211ENST00000544429 C16orf96A6NNT2 1141 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 TRAFD1O14545 582 aaPredicted RBP19.35■□□□□ 0.69
DDX55-211ENST00000544429 GJB3O75712 270 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 PYGMP11217 842 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 PECAM1P16284 738 aaPredicted RBP19.35■□□□□ 0.69
DDX55-211ENST00000544429 MMP13P45452 471 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 MAPK8P45983 427 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 AP1S1P61966 158 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 CCDC15Q0P6D6 951 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 PDK1Q15118 436 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 RALGPS1Q5JS13 557 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 WDR45BQ5MNZ6 344 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 SYCP2LQ5T4T6 812 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 NEK5Q6P3R8 708 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 TRIM69Q86WT6 500 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 PIGKQ92643 395 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 KLHL32Q96NJ5 620 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 NUDCD1Q96RS6 583 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 LGMNQ99538 433 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 BRD8Q9H0E9 1235 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 EBF2Q9HAK2 575 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 SAE1Q9UBE0 346 aaPredicted RBP19.35■□□□□ 0.69
DDX55-211ENST00000544429 PACSIN2Q9UNF0 486 aaPredicted RBP19.35■□□□□ 0.69
DDX55-211ENST00000544429 FADS3Q9Y5Q0 445 aa19.35■□□□□ 0.69
DDX55-211ENST00000544429 AREL1O15033 823 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 PIGNO95427 931 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 CCNB1P14635 433 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 PPP2CBP62714 309 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 DYNLT1P63172 113 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 PPP2CAP67775 309 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 IFI35P80217 286 aaPredicted RBP19.34■□□□□ 0.69
DDX55-211ENST00000544429 ZNF235Q14590 738 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 CCDC6Q16204 474 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 SLC23A3Q6PIS1 610 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 CCDC13Q8IYE1 715 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 LRRN4Q8WUT4 740 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 NSMCE1Q8WV22 266 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 ANP32BQ92688 251 aaKnown RBP19.34■□□□□ 0.69
DDX55-211ENST00000544429 RAB7BQ96AH8 199 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms