RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 VPS11Q9H270 941 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 MAN1C1Q9NR34 630 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 TXNDC16Q9P2K2 825 aa13.85□□□□□ -0.19
HCFC2-202ENST00000544223 FAM237BA0A1B0GVD1 139 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ERI2A8K979 691 aaKnown RBP13.84□□□□□ -0.19
HCFC2-202ENST00000544223 CD160O95971 181 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 GLUD1P00367 558 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ADH1AP07327 375 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ETV4P43268 484 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ARSDP51689 593 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 OXCT1P55809 520 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ARF5P84085 180 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 SLC18A2Q05940 514 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF33AQ06730 810 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 CBLBQ13191 982 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ATXN7L2Q5T6C5 722 aaPredicted RBP13.84□□□□□ -0.19
HCFC2-202ENST00000544223 PKN3Q6P5Z2 889 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 KLHDC10Q6PID8 442 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 MARK2Q7KZI7 788 aaKnown RBP13.84□□□□□ -0.19
HCFC2-202ENST00000544223 MRPL43Q8N983 215 aaKnown RBP13.84□□□□□ -0.19
HCFC2-202ENST00000544223 SH3RF2Q8TEC5 729 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 NAT14Q8WUY8 206 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 FAM136AQ96C01 138 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 SGSM3Q96HU1 749 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 CABS1Q96KC9 395 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 RPL10LQ96L21 214 aaKnown RBP13.84□□□□□ -0.19
HCFC2-202ENST00000544223 CDK5RAP1Q96SZ6 601 aaKnown RBP13.84□□□□□ -0.19
HCFC2-202ENST00000544223 PITPNM3Q9BZ71 974 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 CCDC134Q9H6E4 229 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 SENP1Q9P0U3 644 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 TRIM24O15164 1050 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 CSKP41240 450 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 MAPKAPK2P49137 400 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 NPY2RP49146 381 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 CLCN4P51793 760 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 SEMG2Q02383 582 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 TEAD2Q15562 447 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 PTAR1Q7Z6K3 402 aaPredicted RBP13.84□□□□□ -0.19
HCFC2-202ENST00000544223 MFSD6LQ8IWD5 586 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 TEX26Q8N6G2 289 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 NSMCE1Q8WV22 266 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 CDKL2Q92772 493 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ZSWIM3Q96MP5 696 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 APOL5Q9BWW9 433 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 TM6SF2Q9BZW4 377 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 ZNF180Q9UJW8 692 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 SLC39A10Q9ULF5 831 aa13.84□□□□□ -0.19
HCFC2-202ENST00000544223 GBF1Q92538 1859 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 PHGDHO43175 533 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 SMAD6O43541 496 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 BNIP3LO60238 219 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 AHSGP02765 367 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 NEFHP12036 1026 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 SLC8A1P32418 973 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 GRM3Q14832 879 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 PCID2Q5JVF3 399 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 TMCO4Q5TGY1 634 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 PIGWQ7Z7B1 504 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 LINC00523Q86TU6 105 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 CACNA2D3Q8IZS8 1091 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 LRRC8CQ8TDW0 803 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 MRPS31Q92665 395 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 RMDN2Q96LZ7 410 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 KIFC1Q9BW19 673 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 IQCGQ9H095 443 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 FBXO6Q9NRD1 293 aaPredicted RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 ABCF3Q9NUQ8 709 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 DNMT3BQ9UBC3 853 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 VPS28Q9UK41 221 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 PHTF1Q9UMS5 762 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 TCAF1Q9Y4C2 921 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 A0A1B0GVM2 712 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 TCAF2A6NFQ2 919 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 CLDN11O75508 207 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 ZWINTO95229 277 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 ATXN1LP0C7T5 689 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 ARCN1P48444 511 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 CYTH1Q15438 398 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 PDK4Q16654 411 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 ZNF470Q6ECI4 717 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 ADGRD2Q7Z7M1 963 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 ITIH5Q86UX2 942 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 CMTM8Q8IZV2 173 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 SHKBP1Q8TBC3 707 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 NDNQ99608 321 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 CINPQ9BW66 212 aaPredicted RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 C20orf27Q9GZN8 174 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 POLR1EQ9GZS1 481 aaKnown RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 PPCSQ9HAB8 311 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 SNX15Q9NRS6 342 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 HSFX1Q9UBD0 423 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 UBA2Q9UBT2 640 aaPredicted RBP13.83□□□□□ -0.2
HCFC2-202ENST00000544223 EMCNQ9ULC0 261 aa13.83□□□□□ -0.2
HCFC2-202ENST00000544223 INSIG1O15503 277 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 SNX3O60493 162 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 HAUS5O94927 633 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 GSTA2P09210 222 aa13.82□□□□□ -0.2
HCFC2-202ENST00000544223 TYK2P29597 1187 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms