RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 GRK6P43250 576 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 SUOXP51687 545 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 NXPH1P58417 271 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 SMTNL2Q2TAL5 461 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 ASTE1Q2TB18 679 aaPredicted RBP23.59■■□□□ 1.37
CHFR-222ENST00000544093 TMEM259Q4ZIN3 620 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 KCNT1Q5JUK3 1230 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 ATXN7L2Q5T6C5 722 aaPredicted RBP23.59■■□□□ 1.37
CHFR-222ENST00000544093 SARM1Q6SZW1 724 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 GLRX5Q86SX6 157 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 TMEM145Q8NBT3 493 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 HCAR2Q8TDS4 363 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 HSPH1Q92598 858 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 SP110Q9HB58 689 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 CTTNBP2NLQ9P2B4 639 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 RCOR3Q9P2K3 495 aaPredicted RBP23.59■■□□□ 1.37
CHFR-222ENST00000544093 DKK3Q9UBP4 350 aa23.59■■□□□ 1.37
CHFR-222ENST00000544093 SPAARA0A1B0GVQ0 90 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 WNT9AO14904 365 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 CBFA2T3O75081 653 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 RARAP10276 462 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 SLC25A11Q02978 314 aaKnown RBP23.58■■□□□ 1.37
CHFR-222ENST00000544093 IL10RBQ08334 325 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 TMCO4Q5TGY1 634 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 TMCO3Q6UWJ1 677 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 POLNQ7Z5Q5 900 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 CCDC42Q96M95 316 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 KLHL32Q96NJ5 620 aa23.58■■□□□ 1.37
CHFR-222ENST00000544093 ACACBO00763 2458 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 TPRP12270 2363 aaKnown RBP23.57■■□□□ 1.36
CHFR-222ENST00000544093 J3KR12 359 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 DFFAO00273 331 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 NEMP1O14524 444 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 SLC31A1O15431 190 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 PALMO75781 387 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 TMEM253P0C7T8 217 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 SERPINB6P35237 376 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 CYTH1Q15438 398 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 ARHGAP12Q8IWW6 846 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 RHBDD1Q8TEB9 315 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 KLHDC7BQ96G42 594 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 ZNF599Q96NL3 588 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 CAMK1GQ96NX5 476 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 TUBGCP5Q96RT8 1024 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 SLC17A9Q9BYT1 436 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 LHX3Q9UBR4 397 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 CEP295Q9C0D2 2601 aa23.57■■□□□ 1.36
CHFR-222ENST00000544093 GKP32189 559 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 RXRGP48443 463 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 CSNK1DP48730 415 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 FOXC1Q12948 553 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 KRT81Q14533 505 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 NPWQ8N729 165 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 BAHD1Q8TBE0 780 aaPredicted RBP23.56■■□□□ 1.36
CHFR-222ENST00000544093 ASB12Q8WXK4 309 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 BTBD6Q96KE9 485 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 ZNF641Q96N77 438 aaPredicted RBP23.56■■□□□ 1.36
CHFR-222ENST00000544093 CSPG4P5Q96PW8 444 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 IPO11Q9UI26 975 aaKnown RBP23.56■■□□□ 1.36
CHFR-222ENST00000544093 ZFR2Q9UPR6 939 aaKnown RBP23.56■■□□□ 1.36
CHFR-222ENST00000544093 APOBEC2Q9Y235 224 aaKnown RBP23.56■■□□□ 1.36
CHFR-222ENST00000544093 HS3ST3A1Q9Y663 406 aa23.56■■□□□ 1.36
CHFR-222ENST00000544093 KCNK3O14649 394 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 PROSCO94903 275 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 TCF4P15884 667 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 PRLRP16471 622 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 MAN1A1P33908 653 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 SSR1P43307 286 aaKnown RBP23.55■■□□□ 1.36
CHFR-222ENST00000544093 RENBPP51606 427 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 NSUN2Q08J23 767 aaKnown RBP eCLIP23.55■■□□□ 1.36
CHFR-222ENST00000544093 SGCGQ13326 291 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 SEL1L3Q68CR1 1132 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 TTC7BQ86TV6 843 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 DCP2Q8IU60 420 aaKnown RBP23.55■■□□□ 1.36
CHFR-222ENST00000544093 VOPP1Q96AW1 172 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 CINPQ9BW66 212 aaPredicted RBP23.55■■□□□ 1.36
CHFR-222ENST00000544093 TRIM5Q9C035 493 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 NHEJ1Q9H9Q4 299 aaPredicted RBP23.55■■□□□ 1.36
CHFR-222ENST00000544093 PCDH18Q9HCL0 1135 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 CHD8Q9HCK8 2581 aa23.55■■□□□ 1.36
CHFR-222ENST00000544093 AKR1B15C9JRZ8 316 aaPredicted RBP23.54■■□□□ 1.36
CHFR-222ENST00000544093 AREL1O15033 823 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 KRT7P08729 469 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 XPAP23025 273 aaPredicted RBP23.54■■□□□ 1.36
CHFR-222ENST00000544093 ADKP55263 362 aaKnown RBP23.54■■□□□ 1.36
CHFR-222ENST00000544093 FAM193AP78312 1265 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 ELP6Q0PNE2 266 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 CFAP58Q5T655 872 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 LRRC49Q8IUZ0 686 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 FAM71BQ8TC56 605 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 EXOC2Q96KP1 924 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 LENG8Q96PV6 779 aaPredicted RBP23.54■■□□□ 1.36
CHFR-222ENST00000544093 ANP32EQ9BTT0 268 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 C1QTNF2Q9BXJ5 285 aa23.54■■□□□ 1.36
CHFR-222ENST00000544093 A6NNZ2 444 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 ITGAVP06756 1048 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 THEGLP0DJG4 465 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 AMPD1P23109 780 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 SERPINA4P29622 427 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 HSPA9P38646 679 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms