RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 GDPD4Q6W3E5 623 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 SLC22A18ASQ8N1D0 253 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 SLC25A45Q8N413 288 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 OR6K2Q8NGY2 324 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 VCPIP1Q96JH7 1222 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 TTYH3Q9C0H2 523 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 RAB6CQ9H0N0 254 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 GPR27Q9NS67 375 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 AK5Q9Y6K8 562 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 LOC400499M0QZD8 3231 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 CHD5Q8TDI0 1954 aa13.32□□□□□ -0.28
RTN3-212ENST00000543123 ADAMTS20P59510 1910 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 SPTY2D1-AS1A0A0U1RR47 76 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 IGLON5A6NGN9 336 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 EIF3CLB5ME19 914 aaKnown RBP13.31□□□□□ -0.28
RTN3-212ENST00000543123 RNF103O00237 685 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 TOR1BO14657 336 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 SCAMP1O15126 338 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 CREB3O43889 395 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 CD160O95971 181 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 CSF2P04141 144 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 GP1BAP07359 652 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 CKMT1AP12532 417 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 NME1P15531 152 aaKnown RBP13.31□□□□□ -0.28
RTN3-212ENST00000543123 XPAP23025 273 aaPredicted RBP13.31□□□□□ -0.28
RTN3-212ENST00000543123 RHOAP61586 193 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 PTK2BQ14289 1009 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 GRM3Q14832 879 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 RTP5Q14D33 572 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 DCBLD1Q8N8Z6 715 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 FAM181AQ8N9Y4 354 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 BTN2A2Q8WVV5 523 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 HNRNPLLQ8WVV9 542 aaKnown RBP13.31□□□□□ -0.28
RTN3-212ENST00000543123 BAP1Q92560 729 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 KLHL32Q96NJ5 620 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
RTN3-212ENST00000543123 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 PARVAQ9NVD7 372 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 UCKL1Q9NWZ5 548 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 MFHAS1Q9Y4C4 1052 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 CSNK1G3Q9Y6M4 447 aa13.31□□□□□ -0.28
RTN3-212ENST00000543123 ARID1BQ8NFD5 2236 aaPredicted RBP13.31□□□□□ -0.28
RTN3-212ENST00000543123 DOCK9Q9BZ29 2069 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 POM121BA6NF01 834 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 WASH4PA8MWX3 477 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 RRP8O43159 456 aaKnown RBP13.3□□□□□ -0.28
RTN3-212ENST00000543123 ABL2P42684 1182 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 ABCG1P45844 678 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 THOP1P52888 689 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 TPI1P60174 286 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
RTN3-212ENST00000543123 ELP6Q0PNE2 266 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 SERINC3Q13530 473 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 PDE1CQ14123 709 aaPredicted RBP13.3□□□□□ -0.28
RTN3-212ENST00000543123 FGL2Q14314 439 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 CFAP58Q5T655 872 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 ATXN7L2Q5T6C5 722 aaPredicted RBP13.3□□□□□ -0.28
RTN3-212ENST00000543123 ZCCHC8Q6NZY4 707 aaKnown RBP13.3□□□□□ -0.28
RTN3-212ENST00000543123 LEKR1Q6ZMV7 388 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 LRRC69Q6ZNQ3 347 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 TTC7BQ86TV6 843 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 MCOLN2Q8IZK6 566 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 UMODL1-AS1Q8N2C9 162 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 ZNF548Q8NEK5 533 aaPredicted RBP13.3□□□□□ -0.28
RTN3-212ENST00000543123 CXorf40AQ8TE69 158 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 BMFQ96LC9 184 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 DEPDC7Q96QD5 511 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 DKK3Q9UBP4 350 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 FZD10Q9ULW2 581 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 ACTL7AQ9Y615 435 aa13.3□□□□□ -0.28
RTN3-212ENST00000543123 URB1O60287 2271 aaKnown RBP13.3□□□□□ -0.28
RTN3-212ENST00000543123 SMG1Q96Q15 3661 aaKnown RBP13.29□□□□□ -0.28
RTN3-212ENST00000543123 TCRBV5S1A1TA0A578 114 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 SMTNL1A8MU46 457 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 RASA4BC9J798 803 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 AREL1O15033 823 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 RAD51BO15315 384 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 RASA4O43374 803 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 TM7SF2O76062 418 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 TNFAIP3P21580 790 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 GKP32189 559 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 ACTN2P35609 894 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 NDST2P52849 883 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 RPL7AP62424 266 aaKnown RBP13.29□□□□□ -0.28
RTN3-212ENST00000543123 YPEL5P62699 121 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 SEMG2Q02383 582 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 TYRO3Q06418 890 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 FZD2Q14332 565 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 NCAPHQ15003 741 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 APTXQ7Z2E3 356 aaKnown RBP13.29□□□□□ -0.28
RTN3-212ENST00000543123 DNAAF5Q86Y56 855 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 PYROXD2Q8N2H3 581 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 HCAR2Q8TDS4 363 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms