RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 COPS7BQ9H9Q2 264 aaPredicted RBP16.78■□□□□ 0.28
KDM2B-216ENST00000543025 NCKIPSDQ9NZQ3 722 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 COPG1Q9Y678 874 aaKnown RBP16.78■□□□□ 0.28
KDM2B-216ENST00000543025 FAM95CA0A1B0GW59 222 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 SMIM18P0DKX4 95 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 ETS2P15036 469 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
KDM2B-216ENST00000543025 CTBP1Q13363 440 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 ZNF460Q14592 562 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 TICAM1Q8IUC6 712 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 RNF148Q8N7C7 305 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 TRPV1Q8NER1 839 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 USP33Q8TEY7 942 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 NXNL1Q96CM4 212 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 MAELQ96JY0 434 aaKnown RBP16.78■□□□□ 0.28
KDM2B-216ENST00000543025 MARK4Q96L34 752 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 SENP8Q96LD8 212 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 TSGA13Q96PP4 275 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 PPP1R10Q96QC0 940 aaKnown RBP16.78■□□□□ 0.28
KDM2B-216ENST00000543025 ETAA1Q9NY74 926 aa16.78■□□□□ 0.28
KDM2B-216ENST00000543025 TRPC5OSA6NMA1 111 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 NPHS1O60500 1241 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 BCAS2O75934 225 aaPredicted RBP16.77■□□□□ 0.28
KDM2B-216ENST00000543025 VAPBO95292 243 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 PGM3O95394 542 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 LHX1P48742 406 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 MPP1Q00013 466 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 LSAMPQ13449 338 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 POU6F1Q14863 301 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 ARHGEF6Q15052 776 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 PM20D1Q6GTS8 502 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 CEP97Q8IW35 865 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 CCNYL1Q8N7R7 359 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 KDM1BQ8NB78 822 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 SPATA22Q8NHS9 363 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 RAET1EQ8TD07 263 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 GPR78Q96P69 363 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 MRPL46Q9H2W6 279 aaKnown RBP16.77■□□□□ 0.28
KDM2B-216ENST00000543025 TMEM30AQ9NV96 361 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 AP4B1Q9Y6B7 739 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 MYBPHLA2RUH7 354 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 ANKRD33BA6NCL7 494 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 DYNC1LI2O43237 492 aaPredicted RBP16.77■□□□□ 0.28
KDM2B-216ENST00000543025 CRTAMO95727 393 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 PGK1P00558 417 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 CYBAP13498 195 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 IGFBP6P24592 240 aaPredicted RBP16.77■□□□□ 0.28
KDM2B-216ENST00000543025 TSTD2Q5T7W7 516 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 TWF2Q6IBS0 349 aaKnown RBP16.77■□□□□ 0.28
KDM2B-216ENST00000543025 PPHLN1Q8NEY8 458 aaKnown RBP16.77■□□□□ 0.28
KDM2B-216ENST00000543025 LENG1Q96BZ8 264 aaPredicted RBP16.77■□□□□ 0.28
KDM2B-216ENST00000543025 ZFP42Q96MM3 310 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 UBE2OQ9C0C9 1292 aaKnown RBP16.77■□□□□ 0.28
KDM2B-216ENST00000543025 UBAP1Q9NZ09 502 aa16.77■□□□□ 0.28
KDM2B-216ENST00000543025 PRSS51A0A1B0GVH4 220 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 ANXA9O76027 345 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 MT-CYBP00156 380 aaPredicted RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 HSPA1AP0DMV8 641 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 HSPA1BP0DMV9 641 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 CCNCP24863 283 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 HSPA13P48723 471 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 CLCN2P51788 898 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 KPNA2P52292 529 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 SH2D4BQ5SQS7 431 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 BHLHA9Q7RTU4 235 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 PIWIL4Q7Z3Z4 852 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 SPATA24Q86W54 205 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 LILRA2Q8N149 483 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 TMEM86AQ8N2M4 240 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 CEP70Q8NHQ1 597 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 TMA16Q96EY4 203 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 FCRL5Q96RD9 977 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 OMDQ99983 421 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 FTHL17Q9BXU8 183 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 TRIM17Q9Y577 477 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 PTCH2Q9Y6C5 1203 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 TCAF2A6NFQ2 919 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 STX16-NPEPL1H3BU86 382 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 DFFAO00273 331 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 CLPTM1O96005 669 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 RPL5P46777 297 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 ARCN1P48444 511 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 ADAM17P78536 824 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 ESRP1Q6NXG1 681 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 CCDC117Q8IWD4 279 aaPredicted RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 MFSD6LQ8IWD5 586 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 IPMKQ8NFU5 416 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 RNF34Q969K3 372 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 PRICKLE1Q96MT3 831 aaPredicted RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 NPAS2Q99743 824 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 MRPL57Q9BQC6 102 aaKnown RBP16.76■□□□□ 0.27
KDM2B-216ENST00000543025 NUP205Q92621 2012 aa16.76■□□□□ 0.27
KDM2B-216ENST00000543025 A0A087X1B8 175 aa16.75■□□□□ 0.27
KDM2B-216ENST00000543025 TMEM233B4DJY2 109 aa16.75■□□□□ 0.27
KDM2B-216ENST00000543025 HHLA1C9JL84 531 aa16.75■□□□□ 0.27
KDM2B-216ENST00000543025 ACOT8O14734 319 aa16.75■□□□□ 0.27
KDM2B-216ENST00000543025 TREHO43280 583 aa16.75■□□□□ 0.27
KDM2B-216ENST00000543025 TNFAIP8O95379 198 aa16.75■□□□□ 0.27
KDM2B-216ENST00000543025 CACNB2Q08289 660 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms