RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 METTL18O95568 372 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 POP4O95707 220 aaKnown RBP21.05■□□□□ 0.96
OTUB1-211ENST00000543004 MT-CYBP00156 380 aaPredicted RBP21.05■□□□□ 0.96
OTUB1-211ENST00000543004 PSMB4P28070 264 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 AVPR2P30518 371 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 CD86P42081 329 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 MAGEA9P43362 315 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 PSMD8P48556 350 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 DGKEP52429 567 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 RPS14P62263 151 aaKnown RBP21.05■□□□□ 0.96
OTUB1-211ENST00000543004 FAXCQ5TGI0 409 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 PRPF39Q86UA1 669 aaKnown RBP21.05■□□□□ 0.96
OTUB1-211ENST00000543004 PIP4K2CQ8TBX8 421 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 MRGPRX1Q96LB2 322 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 KRT12Q99456 494 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 FERMT1Q9BQL6 677 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 RSPH14Q9UHP6 348 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 TRHDEQ9UKU6 1024 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 EML5Q05BV3 1969 aa21.05■□□□□ 0.96
OTUB1-211ENST00000543004 K7ESF4 209 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 STK10O94804 968 aaKnown RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 UGT2B4P06133 528 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 CSNK1DP48730 415 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 FNTAP49354 379 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 ZNF572Q7Z3I7 529 aaPredicted RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 CCDC89Q8N998 374 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 MDGA1Q8NFP4 955 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 TSTD1Q8NFU3 115 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 IMP4Q96G21 291 aaKnown RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 OXNAD1Q96HP4 312 aaPredicted RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 SLC25A51Q9H1U9 297 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 POLMQ9NP87 494 aaPredicted RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 FARP1Q9Y4F1 1045 aaPredicted RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 USP34Q70CQ2 3546 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 CCDC188H7C350 402 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 MID1O15344 667 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 RPL22P35268 128 aaKnown RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 PTGIRP43119 386 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 SKOR1P84550 965 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 CKAP4Q07065 602 aaKnown RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 DMWDQ09019 674 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 P3H1Q32P28 736 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 ARHGEF18Q6ZSZ5 1173 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 MAML2Q8IZL2 1156 aaPredicted RBP21.04■□□□□ 0.96
OTUB1-211ENST00000543004 DTWD2Q8NBA8 298 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 KLHL32Q96NJ5 620 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 GBA3Q9H227 469 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 NEU2Q9Y3R4 380 aa21.04■□□□□ 0.96
OTUB1-211ENST00000543004 KPNA3O00505 521 aaPredicted RBP21.03■□□□□ 0.96
OTUB1-211ENST00000543004 ALOX15BO15296 676 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 OPHN1O60890 802 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 SLC8A1P32418 973 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 VPS41P49754 854 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 CCR3P51677 355 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 AP1S1P61966 158 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 TRAF2Q12933 501 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 CST6Q15828 149 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 TMEM31Q5JXX7 168 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 SYCP2LQ5T4T6 812 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 ZNF776Q68DI1 518 aaPredicted RBP21.03■□□□□ 0.96
OTUB1-211ENST00000543004 KIAA1324Q6UXG2 1013 aaKnown RBP21.03■□□□□ 0.96
OTUB1-211ENST00000543004 KDELC2Q7Z4H8 507 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 ZSWIM9Q86XI8 627 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 PGBD3Q8N328 593 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 ARRDC3Q96B67 414 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 FCRL5Q96RD9 977 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 IER2Q9BTL4 223 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 CPEB1Q9BZB8 566 aaKnown RBP21.03■□□□□ 0.96
OTUB1-211ENST00000543004 TPSD1Q9BZJ3 242 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 PCYOX1Q9UHG3 505 aa21.03■□□□□ 0.96
OTUB1-211ENST00000543004 GPR37L1O60883 481 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 KRT14P02533 472 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 TERF1P54274 439 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 OLIG2Q13516 323 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 TUBB2AQ13885 445 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 NUMA1Q14980 2115 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 GDPD4Q6W3E5 623 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 MAMSTRQ6ZN01 415 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 C1orf210Q8IVY1 113 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 AADATQ8N5Z0 425 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 TMIEQ8NEW7 156 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 PDCD6IPQ8WUM4 868 aaKnown RBP21.02■□□□□ 0.96
OTUB1-211ENST00000543004 SIPA1Q96FS4 1042 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 MLPHQ9BV36 600 aaPredicted RBP21.02■□□□□ 0.96
OTUB1-211ENST00000543004 TUBB2BQ9BVA1 445 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 BCCIPQ9P287 314 aaKnown RBP eCLIP21.02■□□□□ 0.96
OTUB1-211ENST00000543004 SERGEFQ9UGK8 458 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 EBF1Q9UH73 591 aa21.02■□□□□ 0.96
OTUB1-211ENST00000543004 TRAFD1O14545 582 aaPredicted RBP21.01■□□□□ 0.95
OTUB1-211ENST00000543004 RNASEH1O60930 286 aaKnown RBP21.01■□□□□ 0.95
OTUB1-211ENST00000543004 PMPCBO75439 489 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 PRNPP04156 253 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 PDHA1P08559 390 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 RAD51Q06609 339 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 BCL2L1Q07817 233 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 PCSK7Q16549 785 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 LRRC73Q5JTD7 316 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 ITPRIPL1Q6GPH6 555 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 LRRN4CLQ8ND94 238 aa21.01■□□□□ 0.95
OTUB1-211ENST00000543004 PRCCQ92733 491 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms