RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 CCDC166P0CW27 439 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 PSMD8P48556 350 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 TAF6P49848 677 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 LRP8Q14114 963 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 FASTKQ14296 549 aaKnown RBP13.07□□□□□ -0.32
DDX11-223ENST00000542838 POU6F1Q14863 301 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 GRIK4Q16099 956 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 PIWIL4Q7Z3Z4 852 aaKnown RBP13.07□□□□□ -0.32
DDX11-223ENST00000542838 MFSD6LQ8IWD5 586 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 SPPL2BQ8TCT7 592 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 TOP1MTQ969P6 601 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 NTAN1Q96AB6 310 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 FAM210AQ96ND0 272 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 LIN28AQ9H9Z2 209 aaKnown RBP13.07□□□□□ -0.32
DDX11-223ENST00000542838 GDAP2Q9NXN4 497 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 CACNA2D2Q9NY47 1150 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 PPP2R3BQ9Y5P8 575 aa13.07□□□□□ -0.32
DDX11-223ENST00000542838 TSC2P49815 1807 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 PRORSD1PA6NEY8 169 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 H3BNH8 94 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 H3BRB1 525 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 AP3B1O00203 1094 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 FBP2O00757 339 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 DNAJB1P25685 340 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 CDK9P50750 372 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 EMP3P54852 163 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 MAP3K7CLP57077 242 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 GALNT2Q10471 571 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 INTS6LQ5JSJ4 861 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 PKN3Q6P5Z2 889 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 ALKAL1Q6UXT8 129 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 ARMCX2Q7L311 632 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 LINC00523Q86TU6 105 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 ERI1Q8IV48 349 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 HMGCLL1Q8TB92 370 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 ABTB1Q969K4 478 aaPredicted RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 SLCO4A1Q96BD0 722 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 PPWD1Q96BP3 646 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 RMND5BQ96G75 393 aaPredicted RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 CELF6Q96J87 481 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 CAMKK2Q96RR4 588 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 ULBP1Q9BZM6 244 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 TUT1Q9H6E5 874 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 NOL11Q9H8H0 719 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 PNPLA3Q9NST1 481 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 PSMD12O00232 456 aaPredicted RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 TRIM24O15164 1050 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 UBDO15205 165 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 FYNP06241 537 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
DDX11-223ENST00000542838 SLC7A1P30825 629 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 ALDH3B2P48448 385 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 HCAR3P49019 387 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 SCNN1BP51168 640 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 AIF1P55008 147 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 SULT2A1Q06520 285 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 TRAP1Q12931 704 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 TMED1Q13445 227 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 SQLEQ14534 574 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 PCID2Q5JVF3 399 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 MARCH8Q5T0T0 291 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 LAYNQ6UX15 382 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 MAMDC4Q6UXC1 1216 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 CLEC20AQ6ZU45 233 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 SNX31Q8N9S9 440 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 SPATA22Q8NHS9 363 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 HEXDCQ8WVB3 486 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 MRPL57Q9BQC6 102 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 C16orf70Q9BSU1 422 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 FAM49AQ9H0Q0 323 aaPredicted RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 OSBPL2Q9H1P3 480 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 CYP4F12Q9HCS2 524 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 DDIT4Q9NX09 232 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 CHCHD3Q9NX63 227 aaKnown RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 FBXW11Q9UKB1 542 aa13.06□□□□□ -0.32
DDX11-223ENST00000542838 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
DDX11-223ENST00000542838 SMIM28A0A1B0GU29 152 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 ASB14A6NK59 587 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 GPC4O75487 556 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 ATP5F1P24539 256 aaPredicted RBP13.05□□□□□ -0.32
DDX11-223ENST00000542838 EPHX2P34913 555 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 HMBOX1Q6NT76 420 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 ESRP1Q6NXG1 681 aaKnown RBP13.05□□□□□ -0.32
DDX11-223ENST00000542838 NOTUMQ6P988 496 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 PAQR9Q6ZVX9 377 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 CHSY3Q70JA7 882 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 KCTD13Q8WZ19 329 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 MAML3Q96JK9 1138 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 ELP3Q9H9T3 547 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 CDHR5Q9HBB8 845 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 SPAG4Q9NPE6 437 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 OLAHQ9NV23 265 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 HEMK1Q9Y5R4 338 aaPredicted RBP13.05□□□□□ -0.32
DDX11-223ENST00000542838 TCRBV3S1A0A5B6 114 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 YJEFN3A6XGL0 299 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 PLOD2O00469 737 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 PSMD3O43242 534 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 NCAM1P13591 858 aa13.05□□□□□ -0.32
DDX11-223ENST00000542838 DNAJB2P25686 324 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms