RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 WDCPQ9H6R7 721 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 C12orf10Q9HB07 376 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF304Q9HCX3 659 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 TRPC7Q9HCX4 862 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 PALMDQ9NP74 551 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 ZNF212Q9UDV6 495 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 NFE2L3Q9Y4A8 694 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 SPEF1Q9Y4P9 236 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 MYH7BA7E2Y1 1941 aa6.05□□□□□ -1.44
XRCC4-206ENST00000542685 TRPM3Q9HCF6 1732 aaPredicted RBP6.05□□□□□ -1.44
XRCC4-206ENST00000542685 KAT6AQ92794 2004 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 MYH6P13533 1939 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 SH3PXD2BA1X283 911 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 SIGLEC16A6NMB1 481 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 TMEM114B3SHH9 223 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 M0QYG6 137 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 TRAFD1O14545 582 aaPredicted RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 AREL1O15033 823 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 SPTLC2O15270 562 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 TEX28O15482 410 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 RNMTO43148 476 aaKnown RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 AP1G1O43747 822 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 BAIAP3O94812 1187 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 KRT14P02533 472 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 PDHA1P08559 390 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 EBLN1P0CF75 366 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 HSPA1AP0DMV8 641 aaKnown RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 HSPA1BP0DMV9 641 aaKnown RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 ATP1A3P13637 1013 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 NFKBIAP25963 317 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 SERPINB3P29508 390 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 HMOX2P30519 316 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 ME1P48163 572 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 KRT6CP48668 564 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 GPC3P51654 580 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 HK3P52790 923 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 TBL3Q12788 808 aaKnown RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 RCN2Q14257 317 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 PLS1Q14651 629 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 SLC39A14Q15043 492 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 MAP3K21Q5TCX8 1036 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 TWF2Q6IBS0 349 aaKnown RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 DUS1LQ6P1R4 473 aaKnown RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 DHRS4L2Q6PKH6 230 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 TMTC3Q6ZXV5 915 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 USP45Q70EL2 814 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 PTF1AQ7RTS3 328 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 USP37Q86T82 979 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 VPS36Q86VN1 386 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 SFR1Q86XK3 245 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 GRAMD2AQ8IUY3 354 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 ENAHQ8N8S7 591 aaPredicted RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 TNIP2Q8NFZ5 429 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 HASPINQ8TF76 798 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 RFKQ969G6 155 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 EME1Q96AY2 570 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 KAZALD1Q96I82 304 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 SENP7Q9BQF6 1050 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 ALG8Q9BVK2 526 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 NUF2Q9BZD4 464 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 ANKRD2Q9GZV1 360 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 DDX47Q9H0S4 455 aaKnown RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 DHX36Q9H2U1 1008 aaKnown RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 THAP9Q9H5L6 903 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 KMT5AQ9NQR1 393 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 GIN1Q9NXP7 522 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 C9orf78Q9NZ63 289 aaPredicted RBP6.04□□□□□ -1.44
XRCC4-206ENST00000542685 CHPF2Q9P2E5 772 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 SNX12Q9UMY4 172 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 STXBP5LQ9Y2K9 1186 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 HYOU1Q9Y4L1 999 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 RAD54BQ9Y620 910 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 CPDO75976 1380 aa6.04□□□□□ -1.44
XRCC4-206ENST00000542685 STK36Q9NRP7 1315 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 DNAJC9-AS1A6NH13 148 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 CGB1A6NKQ9 187 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 CENPBD1B2RD01 187 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 ERVV-2B6SEH9 535 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 GOLGA8MH3BSY2 632 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 INO80B-WBP1J3KQ70 363 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 CES2O00748 559 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 SLC16A6O15403 523 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 ATP9AO75110 1047 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 SOAT2O75908 522 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 UNC5CO95185 931 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 FGFR1OPO95684 399 aaKnown RBP6.03□□□□□ -1.44
XRCC4-206ENST00000542685 IL33O95760 270 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 APOEP02649 317 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 AHSGP02765 367 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 KRT16P08779 473 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 UBL4AP11441 157 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 M6PRP20645 277 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 TKTP29401 623 aaKnown RBP6.03□□□□□ -1.44
XRCC4-206ENST00000542685 PDIA3P30101 505 aaKnown RBP6.03□□□□□ -1.44
XRCC4-206ENST00000542685 CD6P30203 668 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 CDC25CP30307 473 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 CSTF2P33240 577 aaKnown RBP eCLIP6.03□□□□□ -1.44
XRCC4-206ENST00000542685 SERPINB6P35237 376 aa6.03□□□□□ -1.44
XRCC4-206ENST00000542685 CYLC1P35663 651 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms